Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHRNA9Q9UGM1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 RARSP1-201ENST00000542842 1418 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AL359715.4-201ENST00000606629 1436 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 U8.4-201ENST00000363626 134 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 MORF4L1P4-201ENST00000450245 976 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 IGHV5-78-201ENST00000450948 295 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AC090114.3-201ENST00000479267 829 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AC109462.1-201ENST00000491087 368 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 RPS27AP16-201ENST00000492222 470 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 RN7SL244P-201ENST00000493405 297 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 HMGB3P16-201ENST00000508037 287 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 COX6B1P5-201ENST00000509843 249 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AC012339.2-201ENST00000523996 453 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 BNIP3P1-201ENST00000547295 580 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 MIR3691-201ENST00000578066 90 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 PSMA6P4-201ENST00000603247 718 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 AC007342.8-201ENST00000623278 678 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 LINC01739-205ENST00000641890 573 ntBASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHRNA9Q9UGM1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC083843.3-201ENST00000623679 2186 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RNU1-106P-201ENST00000384382 164 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 SNORA70.10-201ENST00000384515 134 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC005522.1-201ENST00000395416 346 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 ATP5HP3-201ENST00000396994 486 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 Z97832.1-201ENST00000402490 328 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RNU4-34P-201ENST00000410431 124 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 GSTM3P2-201ENST00000412746 530 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 BX510359.3-201ENST00000422168 306 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 OR2AH1P-201ENST00000425717 928 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RPS20P1-201ENST00000434853 354 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 HMGB3P9-201ENST00000441799 583 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 TCEA1P1-201ENST00000449716 880 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC093166.2-201ENST00000455969 1017 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RNU7-27P-201ENST00000459281 62 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RPS17P2-201ENST00000461663 408 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RN7SL799P-201ENST00000475891 298 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC074386.1-201ENST00000476560 767 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 FABP5P6-201ENST00000510588 409 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC004980.4-201ENST00000513375 203 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 ENPP7P9-201ENST00000514456 627 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RN7SKP66-201ENST00000516681 231 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms