Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR4271-201ENST00000582451 67 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 FAM157B-203ENST00000639350 358 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 MT-RNR2-201ENST00000387347 1559 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 HSPD1P9-201ENST00000420325 1636 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 RNU2-22P-201ENST00000411266 212 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC009237.5-201ENST00000414271 501 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC094019.1-201ENST00000434678 472 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL450263.2-201ENST00000439400 589 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 CXCR2P1-202ENST00000443392 1074 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 POU5F1P5-201ENST00000445059 658 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 GDI2P2-201ENST00000445131 608 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL033528.1-201ENST00000453780 140 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 RN7SL369P-201ENST00000477138 299 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC079382.1-201ENST00000493346 557 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC008628.2-201ENST00000502605 298 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 KHDC1P1-201ENST00000511053 508 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 IGKV1D-22-201ENST00000518953 324 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 COX6B1P4-201ENST00000519826 484 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC107214.2-201ENST00000608204 634 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL158209.2-201ENST00000619266 216 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 AP000648.2-201ENST00000624182 404 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 AL021877.2-201ENST00000624442 10684 ntBASIC6.91□□□□□ -1.3
CNTN3Q9P232 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CNTN3Q9P232 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CNTN3Q9P232 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC005618.1-201ENST00000606901 3148 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC013488.1-201ENST00000526618 1838 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms