Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL591438.1-201ENST00000433508 581 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 MTCO1P53-201ENST00000441633 699 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 RPL31P44-201ENST00000447680 377 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 BX276092.8-201ENST00000455722 250 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 PSMC1P13-201ENST00000458195 985 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 RNA5SP43-201ENST00000516559 110 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL20A1Q9P218 OR8K4P-201ENST00000534608 872 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC008033.2-201ENST00000542626 177 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 MIR4480-201ENST00000582492 71 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 VN1R87P-201ENST00000596706 487 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 CLIC4P2-201ENST00000601934 717 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC073387.2-201ENST00000604797 784 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL20A1Q9P218 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
COL20A1Q9P218 AC140134.1-201ENST00000511830 3544 ntBASIC5.84□□□□□ -1.47
COL20A1Q9P218 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL20A1Q9P218 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
COL20A1Q9P218 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL20A1Q9P218 Z95114.1-201ENST00000624264 14574 ntBASIC5.84□□□□□ -1.48
COL20A1Q9P218 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL20A1Q9P218 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.84□□□□□ -1.48
COL20A1Q9P218 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.84□□□□□ -1.48
COL20A1Q9P218 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC007996.1-201ENST00000620414 2821 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 RNU6-666P-201ENST00000363499 107 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC010385.1-201ENST00000412374 256 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 MTATP6P20-201ENST00000414147 562 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 LINC01347-201ENST00000417964 355 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC023128.2-201ENST00000420880 1223 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 MGAT2P2-201ENST00000427194 797 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 HMGB3P5-201ENST00000428894 612 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AL035246.1-201ENST00000433554 1255 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AL161722.2-201ENST00000434731 981 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 MTND2P40-201ENST00000436718 841 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC016772.1-201ENST00000444170 1261 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 SNRPCP3-201ENST00000474888 476 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 RPS24P16-201ENST00000497294 392 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 MRPS33P2-201ENST00000507850 322 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC021193.1-201ENST00000511607 420 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 SNORA19.3-201ENST00000516165 130 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC091163.3-201ENST00000518269 1144 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 BRD9P1-201ENST00000529855 560 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 OR7E128P-201ENST00000532736 1024 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AP002906.1-201ENST00000603405 233 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC011374.2-201ENST00000607135 526 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 EIF3FP1-201ENST00000613970 806 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC100827.5-201ENST00000615883 426 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 ZNF849P-201ENST00000594711 1566 ntBASIC5.83□□□□□ -1.48
COL20A1Q9P218 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL20A1Q9P218 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.83□□□□□ -1.48
COL20A1Q9P218 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL20A1Q9P218 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms