Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNA5SP90-201ENST00000364801 99 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 RN7SKP273-201ENST00000411392 314 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 RPL30P3-201ENST00000424262 333 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 FAM204CP-201ENST00000424489 642 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 FO393419.3-201ENST00000428741 282 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC097499.1-201ENST00000444277 208 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 KNOP1P3-201ENST00000446933 426 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC097484.1-201ENST00000471148 389 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AL161747.1-201ENST00000480068 358 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 IGBP1P4-201ENST00000503202 879 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC147055.3-201ENST00000510547 851 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC027308.1-201ENST00000517993 110 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC016180.1-201ENST00000567945 403 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC108738.1-201ENST00000603703 237 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC018618.2-201ENST00000604770 446 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC010632.3-201ENST00000611377 369 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 BNIP3P41-202ENST00000616656 861 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AC018445.2-201ENST00000622987 260 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 AL034549.2-201ENST00000618285 3373 ntBASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHMP4AQ9BY43 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 MTND3P20-201ENST00000407663 186 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 LINC01881-201ENST00000416103 412 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AL031736.2-201ENST00000426573 787 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 HSPD1P12-201ENST00000429127 1069 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC021193.1-201ENST00000511607 420 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC098976.1-201ENST00000513014 541 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 EIF3KP3-201ENST00000514461 639 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC114947.2-201ENST00000565748 2125 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC233266.2-201ENST00000567067 528 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 OR1F2P-201ENST00000570470 933 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 RN7SL708P-201ENST00000580952 299 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC008814.1-201ENST00000603797 406 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AC073137.1-201ENST00000605636 634 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 THAP12P4-201ENST00000528321 2266 ntBASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.72□□□□□ -1.33
CHMP4AQ9BY43 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CHMP4AQ9BY43 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHMP4AQ9BY43 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CHMP4AQ9BY43 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.71□□□□□ -1.33
CHMP4AQ9BY43 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.71□□□□□ -1.33
CHMP4AQ9BY43 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 U8.4-201ENST00000363626 134 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 SNORA70-201ENST00000384436 135 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 AC136624.1-201ENST00000400791 413 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 RN7SKP126-201ENST00000411143 300 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 RPL19P16-201ENST00000433839 588 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 RPS15AP29-201ENST00000445539 400 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 AURKAPS1-201ENST00000451805 1212 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 AL513343.1-201ENST00000451818 792 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 RPS20P4-201ENST00000461659 355 ntBASIC6.71□□□□□ -1.34
CHMP4AQ9BY43 RPS4XP12-201ENST00000461747 709 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms