Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC104634.1-201ENST00000452720 462 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC023141.9-201ENST00000458734 412 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC026348.1-201ENST00000462549 1053 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RN7SL423P-201ENST00000486202 304 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RN7SL547P-201ENST00000490793 290 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RPL15P21-201ENST00000495592 567 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 SUMO1P1-201ENST00000497904 306 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC108157.1-201ENST00000510511 539 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RPL7L1P4-201ENST00000513004 707 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC105031.1-201ENST00000518550 476 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 YWHABP2-201ENST00000540201 713 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC022884.2-201ENST00000578535 580 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AL133247.2-201ENST00000603236 482 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 SUGT1P3-202ENST00000604259 383 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC097505.1-201ENST00000610199 565 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC015914.2-201ENST00000618167 288 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AC074276.2-201ENST00000619891 348 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 MIR6839-201ENST00000620425 113 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 MIR8080-201ENST00000622224 89 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 CR392039.4-201ENST00000624968 501 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 MIR6715B-201ENST00000637172 77 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 AL049767.1-202ENST00000637826 242 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 RNF6P1-201ENST00000444889 1784 ntBASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHRDL1Q9BU40 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC126323.6-202ENST00000568092 3511 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RN7SKP229-201ENST00000410465 302 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RN7SKP293-201ENST00000411389 296 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RPL30P3-201ENST00000424262 333 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC012519.1-201ENST00000424588 610 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RWDD4P2-201ENST00000426392 563 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RPL35AP21-201ENST00000437667 333 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RSL24D1P2-201ENST00000445584 366 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RPL34P26-201ENST00000445636 354 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 NOP56P2-201ENST00000447491 769 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 CYCSP34-201ENST00000458172 304 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RPL7P41-201ENST00000485823 957 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 RWDD4P1-201ENST00000488019 565 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC090543.1-201ENST00000492168 485 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC022790.1-201ENST00000522872 204 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 HMGB1P40-201ENST00000525121 540 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 NF1P5-201ENST00000588287 448 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC067852.7-201ENST00000623270 535 ntBASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRDL1Q9BU40 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms