Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL132857.1-201ENST00000555180 708 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP88Q99567 OR1F2P-201ENST00000570470 933 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 AC090525.3-201ENST00000605601 189 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP88Q99567 AC140725.3-201ENST00000616193 880 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 AC021106.3-201ENST00000623925 531 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP88Q99567 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP88Q99567 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NUP88Q99567 MTCO1P15-201ENST00000529569 1526 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP88Q99567 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NUP88Q99567 AC114947.2-201ENST00000565748 2125 ntBASIC6.19□□□□□ -1.42
NUP88Q99567 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP88Q99567 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP88Q99567 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 AC017007.4-201ENST00000503353 1352 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 RLIMP2-201ENST00000427891 1563 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP88Q99567 RNU1-146P-201ENST00000364015 165 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP88Q99567 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP88Q99567 DNAJC19P6-201ENST00000401853 280 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 LINC01881-201ENST00000416103 412 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 NANOGP5-201ENST00000424456 877 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 VTI1BP4-201ENST00000427516 527 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 AL353093.1-201ENST00000441292 436 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC073850.1-201ENST00000449243 255 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 AC098826.2-201ENST00000452011 651 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 Z92846.1-201ENST00000456203 268 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 RPL7P32-201ENST00000457119 744 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 RNU7-27P-201ENST00000459281 62 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC104687.1-201ENST00000485829 412 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 RPS12P31-201ENST00000491419 398 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC111193.1-201ENST00000504097 155 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC098862.1-201ENST00000504991 413 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC093720.1-201ENST00000505681 714 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC091912.1-201ENST00000511351 248 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP88Q99567 MORF4L1P3-201ENST00000525966 950 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 OR5AK3P-201ENST00000527486 1297 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 OR8K4P-201ENST00000534608 872 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.18□□□□□ -1.42
NUP88Q99567 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP88Q99567 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 MIR4436B2-201ENST00000581415 91 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 RN7SL356P-201ENST00000582228 248 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 MIR4436B1-201ENST00000583272 91 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 BNIP3P38-201ENST00000601117 544 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 AC087683.2-201ENST00000611384 326 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 AC139713.2-210ENST00000641741 992 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NUP88Q99567 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.18□□□□□ -1.42
NUP88Q99567 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP88Q99567 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NUP88Q99567 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NUP88Q99567 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP88Q99567 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 SNORA17.1-201ENST00000362945 126 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 MIR320B1-201ENST00000390209 79 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AL035419.1-201ENST00000397037 564 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 PPIAP9-201ENST00000403866 498 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 RPL5P19-201ENST00000404228 893 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AP002530.1-201ENST00000405705 684 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 RN7SKP125-201ENST00000410481 302 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 OR51B3P-201ENST00000412287 913 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms