Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
IFT140Q96RY7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
IFT140Q96RY7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
IFT140Q96RY7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AL583835.1-201ENST00000399570 407 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AL590806.1-201ENST00000415818 853 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 NPM1P26-201ENST00000426339 738 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 MRPS21P3-201ENST00000436696 262 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 SNORA74D-201ENST00000516404 141 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 AC136777.2-201ENST00000522979 358 ntBASIC7.49□□□□□ -1.21
IFT140Q96RY7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
IFT140Q96RY7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 RNA5SP119-201ENST00000362715 117 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 ABCC13-202ENST00000463099 3842 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 RPL23AP53-201ENST00000521854 457 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 AC105233.3-201ENST00000531125 744 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 AC093388.1-201ENST00000609166 430 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 LINC01808-202ENST00000641680 1116 ntBASIC7.48□□□□□ -1.21
IFT140Q96RY7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
IFT140Q96RY7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.48□□□□□ -1.21
IFT140Q96RY7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 AL035246.1-201ENST00000433554 1255 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 AL500522.2-201ENST00000448562 343 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 OR7E10P-201ENST00000526420 991 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 PRELID3BP3-201ENST00000584963 545 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 AC012468.1-201ENST00000604888 430 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 CR392039.5-201ENST00000623201 510 ntBASIC7.47□□□□□ -1.21
IFT140Q96RY7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
IFT140Q96RY7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
IFT140Q96RY7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.46□□□□□ -1.21
IFT140Q96RY7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
IFT140Q96RY7 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
IFT140Q96RY7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
IFT140Q96RY7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
IFT140Q96RY7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
IFT140Q96RY7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
IFT140Q96RY7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 AL049830.4-201ENST00000555149 351 ntBASIC7.46□□□□□ -1.22
IFT140Q96RY7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 RN7SL435P-201ENST00000584418 282 ntBASIC7.46□□□□□ -1.22
IFT140Q96RY7 AC007179.3-201ENST00000604976 235 ntBASIC7.46□□□□□ -1.22
IFT140Q96RY7 SNORA51-201ENST00000606420 132 ntBASIC7.46□□□□□ -1.22
IFT140Q96RY7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
IFT140Q96RY7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
IFT140Q96RY7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.46□□□□□ -1.22
IFT140Q96RY7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
IFT140Q96RY7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
IFT140Q96RY7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 AL391684.1-202ENST00000641293 1636 ntBASIC7.45□□□□□ -1.22
IFT140Q96RY7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
IFT140Q96RY7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms