Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC091305.2-201ENST00000624049 1576 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC105402.1-201ENST00000413336 545 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC009784.1-201ENST00000426484 460 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 MOB1AP1-201ENST00000430903 535 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 GSTA7P-201ENST00000438425 448 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 MTCYBP42-201ENST00000444653 1130 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 OR7E116P-201ENST00000448529 957 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 MEMO1P4-201ENST00000453590 386 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 MRPL35P4-201ENST00000453682 566 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC083899.1-201ENST00000454465 3819 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC126121.1-201ENST00000482313 553 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 RPL7P51-201ENST00000490532 749 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 MRPS33P3-201ENST00000513456 322 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC138938.1-201ENST00000515431 782 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 RNU6-1004P-201ENST00000516584 111 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 IGKV3D-34-201ENST00000522638 302 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC090819.1-201ENST00000523800 1111 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 DEFB130C-202ENST00000530001 230 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 OR11H3P-201ENST00000554547 982 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC233702.9-201ENST00000581528 203 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AP002884.5-201ENST00000595053 1132 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC010245.2-201ENST00000606908 1167 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 MIR6809-201ENST00000612189 116 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AL136228.1-201ENST00000622221 319 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 OR8B1P-202ENST00000641132 1178 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 YES1P1-201ENST00000418510 1628 ntBASIC5.18□□□□□ -1.58
SNX18Q96RF0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX18Q96RF0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX18Q96RF0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL445523.1-201ENST00000451184 1362 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL353796.1-201ENST00000561542 3241 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 RNU6-532P-201ENST00000384318 107 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL035419.1-201ENST00000397037 564 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AP000357.1-201ENST00000409926 1165 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 VTA1P1-201ENST00000414044 866 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 TAF13P2-201ENST00000416876 286 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 DPY19L1P2-201ENST00000426647 915 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 FGF7P5-201ENST00000441829 291 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms