Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 PANDAR-201ENST00000629595 1506 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
AP1S3Q96PC3 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.54□□□□□ -1.84
AP1S3Q96PC3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC093719.1-202ENST00000392735 373 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 Z97832.1-201ENST00000402490 328 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL080315.1-201ENST00000406055 466 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 GSTM3P2-201ENST00000412746 530 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 CYP4F29P-201ENST00000420685 446 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 IPPKP1-201ENST00000422501 768 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 SEC63P1-201ENST00000425785 1258 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC005033.1-201ENST00000428904 813 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 SCAND3P1-201ENST00000439854 1060 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 HMGN1P2-201ENST00000445197 310 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC099063.2-201ENST00000446360 662 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 HMGB1P16-201ENST00000447155 540 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC243772.1-201ENST00000451620 410 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL133477.1-201ENST00000457472 514 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC009127.1-201ENST00000467090 155 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 HNRNPKP5-201ENST00000515300 253 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 RNA5SP473-201ENST00000516402 125 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 RNU6-709P-201ENST00000517257 104 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC095055.1-201ENST00000603472 1113 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 COX6CP4-201ENST00000605798 228 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC244100.4-201ENST00000617747 388 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 MIR4727-201ENST00000622232 55 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC011815.3-201ENST00000624194 473 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AC008758.3-201ENST00000507003 1829 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 AL031985.3-201ENST00000565390 2449 ntBASIC3.53□□□□□ -1.84
AP1S3Q96PC3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP1S3Q96PC3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
AP1S3Q96PC3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL121950.1-201ENST00000624993 2077 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RPS6P12-201ENST00000432491 726 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL451139.1-201ENST00000434718 346 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 KNOP1P3-201ENST00000446933 426 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RPL31P15-201ENST00000449770 338 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC090142.2-201ENST00000483263 416 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC069240.1-201ENST00000548774 375 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms