Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 MIR137-201ENST00000385223 102 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 RNA5SP345-201ENST00000410646 108 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 SEPT7P8-201ENST00000413308 775 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 CEACAMP8-201ENST00000413902 580 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AL451139.1-201ENST00000434718 346 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC234781.3-201ENST00000452540 973 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 RN7SL826P-201ENST00000479724 288 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 RPL7P16-201ENST00000479738 738 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 RN7SL558P-201ENST00000497468 299 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 DUX4L52-201ENST00000549363 777 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC079075.1-201ENST00000559543 878 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 BGLT3-201ENST00000564523 994 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 OR1F2P-201ENST00000570470 933 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC010424.2-201ENST00000607594 443 ntBASIC4.49□□□□□ -1.69
COL21A1Q96P44 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL21A1Q96P44 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.49□□□□□ -1.69
COL21A1Q96P44 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AL445487.1-201ENST00000415694 1580 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 OR51C1P-202ENST00000641159 1444 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 MTCO1P15-201ENST00000529569 1526 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 RN7SKP149-201ENST00000363008 344 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC114755.2-201ENST00000413520 361 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 RPL21P108-201ENST00000413857 481 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC096644.3-201ENST00000416788 338 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 VN1R31P-201ENST00000417498 730 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC073648.4-201ENST00000442655 781 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 RPL31P44-201ENST00000447680 377 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 OR52J1P-201ENST00000450596 932 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 ATP5J2P6-201ENST00000565203 266 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 MIR3934-201ENST00000579806 107 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 AP002884.5-201ENST00000595053 1132 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 MIR6748-201ENST00000610433 71 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AL445528.2-201ENST00000620582 470 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 MTCO1P22-201ENST00000604619 1360 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 SAMMSON-226ENST00000642089 1582 ntBASIC4.48□□□□□ -1.69
COL21A1Q96P44 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL21A1Q96P44 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL21A1Q96P44 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 AL672167.1-203ENST00000641299 2975 ntBASIC4.47□□□□□ -1.69
COL21A1Q96P44 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL21A1Q96P44 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL21A1Q96P44 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms