Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MTCO1P18-201ENST00000455518 1419 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 MIR105-1-201ENST00000385222 81 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 MIR143-201ENST00000385300 106 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01347-201ENST00000417964 355 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL133325.1-201ENST00000421090 382 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 RPL19P16-201ENST00000433839 588 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 YWHAZP2-201ENST00000440317 728 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL391987.1-201ENST00000441025 200 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 RPL7P40-201ENST00000481703 745 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 RPSAP51-201ENST00000497462 645 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 OR10V3P-201ENST00000525712 725 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LRRC34P1-201ENST00000542742 915 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC009712.1-201ENST00000564938 316 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 VN1R87P-201ENST00000596706 487 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC234772.3-201ENST00000602277 528 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL049844.2-201ENST00000604280 628 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC005252.1-201ENST00000604518 1063 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC106052.1-201ENST00000608029 497 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC004232.3-201ENST00000622977 525 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AC119674.1-212ENST00000641155 993 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 AL022322.2-201ENST00000624072 20397 ntBASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CDK5RAP3Q96JB5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC004158.1-201ENST00000564508 4319 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 SCARNA15-201ENST00000607520 4325 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SKP153-201ENST00000365026 316 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RNU6-532P-201ENST00000384318 107 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RNA5SP241-201ENST00000391326 114 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 PCNPP4-201ENST00000414817 517 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 LIPT1P1-201ENST00000415870 1186 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RPL7AP49-201ENST00000429522 581 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AL591438.1-201ENST00000433508 581 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 CYCSP12-201ENST00000437729 300 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC016772.1-201ENST00000444170 1261 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SL184P-201ENST00000488308 297 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RPS12P31-201ENST00000491419 398 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RPS24P16-201ENST00000497294 392 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC026414.1-201ENST00000504046 698 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC022360.1-201ENST00000521058 340 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SL290P-201ENST00000578661 300 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AL365400.2-201ENST00000605604 902 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC079395.2-201ENST00000610982 737 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC017007.4-201ENST00000503353 1352 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms