Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 H2AFZP5-201ENST00000446960 382 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AP002371.1-201ENST00000463604 433 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 RPL5P16-201ENST00000471467 790 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 RPL12P20-201ENST00000475538 479 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC020890.1-201ENST00000491837 504 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC087477.6-201ENST00000559595 843 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC125257.1-201ENST00000560400 2930 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 MIR192-201ENST00000384915 110 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC092570.3-201ENST00000420113 693 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC011753.3-201ENST00000443436 406 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 BNIP3P1-201ENST00000547295 580 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 MIR4472-2-201ENST00000582069 67 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AL137072.1-201ENST00000603444 466 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC119501.1-201ENST00000603646 475 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC087283.1-201ENST00000604029 1074 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC073137.1-201ENST00000605636 634 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AL359922.3-201ENST00000624779 1670 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ECHDC3Q96DC8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
ECHDC3Q96DC8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
ECHDC3Q96DC8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AL445487.1-201ENST00000415694 1580 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 RNA5SP397-201ENST00000391323 118 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 NFYAP1-201ENST00000431953 972 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 TMX2P1-201ENST00000436507 708 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC104651.2-201ENST00000447549 528 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC090142.1-201ENST00000465776 462 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 HMGB3P16-201ENST00000508037 287 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC234771.5-201ENST00000600161 514 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC104785.1-201ENST00000603220 588 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 OR7A19P-201ENST00000608051 733 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC015804.1-201ENST00000622935 435 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 AC000374.1-201ENST00000434698 1745 ntBASIC4.71□□□□□ -1.66
ECHDC3Q96DC8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms