Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC021193.1-201ENST00000511607 420 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 MTND2P26-201ENST00000528255 1029 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AP003461.1-201ENST00000528866 78 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC124293.1-201ENST00000530034 493 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 MIR1273E-201ENST00000581165 102 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 VN1R83P-201ENST00000595685 445 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC012616.1-201ENST00000600294 197 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 MRPS35P3-201ENST00000603189 709 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AL158042.1-201ENST00000605338 460 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC009318.3-201ENST00000616916 503 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC007938.2-201ENST00000604666 2634 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 AC068870.3-201ENST00000625077 2536 ntBASIC5.16□□□□□ -1.58
CTHRC1Q96CG8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 AC104964.3-201ENST00000606115 2860 ntBASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 AC097063.1-201ENST00000426714 1797 ntBASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTHRC1Q96CG8 FAM133CP-201ENST00000332869 704 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 RNU6-543P-201ENST00000362576 108 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 RPSAP35-201ENST00000413753 818 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL354868.1-201ENST00000417077 482 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 BX119904.4-201ENST00000424402 301 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MOB1AP1-201ENST00000430903 535 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC073909.1-201ENST00000447112 999 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC005002.1-201ENST00000447458 540 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL133217.1-201ENST00000450980 425 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC233982.1-201ENST00000451247 436 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AURKAPS1-201ENST00000451805 1212 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 YWHAEP1-201ENST00000453697 763 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC091959.2-201ENST00000477363 321 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC020937.1-201ENST00000519677 1013 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC008083.2-201ENST00000546707 476 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC022404.1-201ENST00000555320 273 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 SNORD95-201ENST00000579879 68 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MIR548Y-201ENST00000582739 110 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 FO393422.1-201ENST00000603908 708 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL360219.1-201ENST00000610230 366 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 VIS1.1-201ENST00000610517 203 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MIR6768-201ENST00000610734 72 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AL139407.1-201ENST00000613826 1175 ntBASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms