Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AL390119.1-201ENST00000440329 312 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 EEF1A1P39-201ENST00000440791 250 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC105399.1-202ENST00000447303 205 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 GAPDHP14-201ENST00000450472 937 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC021660.1-201ENST00000465006 554 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC011037.1-201ENST00000483964 558 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC010486.3-201ENST00000511602 785 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RN7SKP34-201ENST00000516142 244 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC005341.1-201ENST00000571086 708 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC010547.6-201ENST00000571789 193 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ZNF92P3-201ENST00000596594 954 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 Z94722.1-201ENST00000604328 474 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC000068.2-201ENST00000608816 460 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC092106.3-201ENST00000611308 722 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC010435.1-201ENST00000623353 1177 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 AC114947.2-201ENST00000565748 2125 ntBASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4AQ8WYN0 DDX18P6-201ENST00000450119 1997 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC023421.1-201ENST00000590535 1785 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RNU4-92P-201ENST00000363783 136 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RNU6-224P-201ENST00000384055 107 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 Y_RNA.472-201ENST00000384322 102 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RNA5SP122-201ENST00000384457 108 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 NACAP7-201ENST00000407371 609 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RPS7P9-201ENST00000414704 586 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC017078.1-201ENST00000416146 368 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 Z93019.1-201ENST00000416450 973 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC002504.1-201ENST00000438281 691 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC097499.1-201ENST00000444277 208 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC244505.3-201ENST00000454598 187 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RANP1-206ENST00000455094 651 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 RPL7P32-201ENST00000457119 744 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC023050.1-201ENST00000498198 304 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 MTCO3P28-201ENST00000513351 515 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC125611.1-201ENST00000549563 229 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AL162431.4-201ENST00000604674 411 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 LSM1P2-201ENST00000604911 322 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC007349.4-201ENST00000608114 532 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AP004607.9-201ENST00000618202 316 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AC073569.3-201ENST00000619055 682 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AL512506.2-201ENST00000624472 458 ntBASIC5.47□□□□□ -1.53
ATG4AQ8WYN0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms