Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.61□□□□□ -1.35
SHKBP1Q8TBC3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC105749.1-201ENST00000631338 2008 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC017007.4-201ENST00000503353 1352 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 Y_RNA.18-201ENST00000362461 102 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RNY4P14-201ENST00000363656 96 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 Y_RNA.295-201ENST00000364918 102 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RNU6-549P-201ENST00000384433 107 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 Y_RNA.548-201ENST00000384656 105 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 GSTA12P-201ENST00000402398 508 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 NCSTNP1-201ENST00000406229 144 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL023284.3-201ENST00000407767 334 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RN7SKP56-201ENST00000410513 331 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RN7SKP121-201ENST00000410842 305 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RNGTTP1-201ENST00000420965 728 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC005534.2-201ENST00000431047 433 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC104850.1-201ENST00000435940 476 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 PSPHP1-201ENST00000450062 261 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 OR6C5P-201ENST00000452388 923 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC023194.2-201ENST00000465398 406 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RN7SL221P-201ENST00000466190 281 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RN7SL326P-201ENST00000477493 296 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RPL34P33-201ENST00000486062 334 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC025458.1-201ENST00000506046 166 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 PTGES3P3-201ENST00000511479 482 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AP003072.1-201ENST00000531740 145 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC125611.2-201ENST00000551907 647 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL157394.1-201ENST00000562983 1224 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 MRPS21P9-201ENST00000571150 257 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RN7SL753P-201ENST00000581238 290 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC063977.5-201ENST00000601044 974 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC012065.4-201ENST00000602445 679 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC009233.1-201ENST00000616477 371 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 AC079298.1-201ENST00000625026 1619 ntBASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHKBP1Q8TBC3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 AC092111.2-201ENST00000611627 1414 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 NEPNP-201ENST00000404786 1371 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 AC011455.2-201ENST00000599320 3336 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 Y_RNA.160-201ENST00000363677 92 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 RNA5SP435-201ENST00000364044 108 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 Y_RNA.460-201ENST00000384255 102 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 RNU6-332P-201ENST00000391193 108 ntBASIC6.59□□□□□ -1.35
SHKBP1Q8TBC3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms