Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 CDC27P2-201ENST00000425026 1922 ntBASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 LINC01613-201ENST00000561476 2780 ntBASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 AL355852.1-201ENST00000454081 1771 ntBASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PIK3C3Q8NEB9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 CASC19-246ENST00000641625 1606 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 RNA5SP346-201ENST00000363541 121 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 RNU4-75P-201ENST00000364621 146 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 OR1L1-202ENST00000373686 1083 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 RNA5SP187-201ENST00000384400 119 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL157702.1-201ENST00000398764 426 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MTCO1P21-201ENST00000416634 589 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 OR6C64P-201ENST00000419708 825 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL136231.1-201ENST00000429407 730 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 HMGB1P45-201ENST00000435986 653 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MTND2P40-201ENST00000436718 841 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL512593.1-201ENST00000444758 779 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL606490.1-201ENST00000452266 765 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL133351.3-201ENST00000454998 193 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC073522.1-201ENST00000483312 377 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 RNA5SP206-201ENST00000516703 121 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 Y_RNA.695-201ENST00000516715 107 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MTND1P5-201ENST00000517906 940 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 NPIPB14P-203ENST00000532298 987 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MT1CP-201ENST00000567054 174 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ZNF322P1-201ENST00000568013 1209 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AGGF1P4-201ENST00000568249 801 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC119403.2-201ENST00000590960 598 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC004987.4-201ENST00000603383 338 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL139286.2-201ENST00000606838 396 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AL355974.3-201ENST00000617383 467 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC090582.1-201ENST00000636321 199 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AF001550.2-201ENST00000636643 217 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MTND5P29-201ENST00000458676 1807 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 MTND5P24-201ENST00000438892 1767 ntBASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PIK3C3Q8NEB9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PIK3C3Q8NEB9 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.59□□□□□ -1.52
PIK3C3Q8NEB9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PIK3C3Q8NEB9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PIK3C3Q8NEB9 AC092104.1-201ENST00000497346 1441 ntBASIC5.58□□□□□ -1.52
PIK3C3Q8NEB9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PIK3C3Q8NEB9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PIK3C3Q8NEB9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms