Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PA2G4P6-201ENST00000438325 1197 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC026348.1-201ENST00000462549 1053 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 RPL5P13-201ENST00000462840 709 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC104971.1-201ENST00000495117 578 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC010350.1-201ENST00000504908 231 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 FABP5P6-201ENST00000510588 409 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SKP260-201ENST00000516907 149 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 TOMM20P1-201ENST00000534518 427 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC134349.2-201ENST00000535136 910 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 SNRPGP1-201ENST00000553864 222 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC087477.6-201ENST00000559595 843 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AL354696.1-201ENST00000614652 497 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC019080.5-201ENST00000624891 757 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 Z73965.1-201ENST00000623412 2297 ntBASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC71LQ8N9Z2 AP001273.1-201ENST00000624493 3152 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 CASC19-281ENST00000642118 1554 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SKP114-201ENST00000410327 279 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL390774.1-201ENST00000411924 246 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL450992.3-201ENST00000413192 568 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 RPL23AP4-201ENST00000427757 463 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 BX323845.1-201ENST00000432417 179 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC007563.3-201ENST00000433233 371 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PPIAP13-201ENST00000434706 478 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 Z99127.2-201ENST00000441426 334 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 BTBD7P2-201ENST00000441962 620 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC064862.4-201ENST00000442180 334 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL513343.1-201ENST00000451818 792 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PPIAP21-201ENST00000464473 501 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 RPS4XP18-201ENST00000495480 763 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC015864.1-201ENST00000496512 544 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC021087.2-201ENST00000504656 1203 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 HMGB1P47-201ENST00000511281 589 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 ACTR6P1-201ENST00000514311 1104 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 RNU6-491P-201ENST00000516099 110 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC087272.1-201ENST00000523624 533 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC027544.3-201ENST00000535082 757 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms