Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 AC025031.4-201ENST00000621248 3271 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 NXPH1-205ENST00000602349 1953 ntBASIC6.97□□□□□ -1.29
VPS8Q8N3P4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS8Q8N3P4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
VPS8Q8N3P4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
VPS8Q8N3P4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VPS8Q8N3P4 RPL32P3-201ENST00000359025 275 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 MIR3065-201ENST00000390137 79 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 GAPDHP49-201ENST00000421421 961 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AC234779.1-201ENST00000425910 285 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 RPS26P2-201ENST00000440331 348 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 DDX39BP2-208ENST00000453923 258 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 RPS23P7-201ENST00000466210 444 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AC109327.1-201ENST00000471666 403 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 OR11I1P-201ENST00000486033 954 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 AC007546.2-201ENST00000623996 360 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.96□□□□□ -1.3
VPS8Q8N3P4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
VPS8Q8N3P4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 RPS29P17-201ENST00000430795 166 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 ACTR3P2-201ENST00000439585 1257 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 HPRT1P1-201ENST00000509498 657 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AL160290.3-201ENST00000604869 165 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AC140113.4-201ENST00000622087 222 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 OR52H1-202ENST00000641796 1061 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 AC068870.3-201ENST00000625077 2536 ntBASIC6.95□□□□□ -1.3
VPS8Q8N3P4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.95□□□□□ -1.3
VPS8Q8N3P4 TCP11X1-202ENST00000622971 1372 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 PHBP16-201ENST00000446318 950 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 MLECP1-201ENST00000615893 709 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 uc_338.13-201ENST00000618243 179 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 AL445363.3-201ENST00000623080 671 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 AP003497.2-201ENST00000624220 967 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 HSPD1P14-201ENST00000432666 1618 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 AC107068.1-201ENST00000563286 4218 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 MAPK10-286ENST00000641208 8747 ntBASIC6.94□□□□□ -1.3
VPS8Q8N3P4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
VPS8Q8N3P4 MIR331-201ENST00000362302 94 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 RPL7P33-201ENST00000444159 742 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 TPT1P12-201ENST00000448968 492 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC093840.1-201ENST00000511599 336 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC090515.3-201ENST00000560431 315 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 MIR3936-201ENST00000584304 110 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AP000843.1-201ENST00000624880 701 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms