Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPS27AP17-201ENST00000463344 455 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RN7SL91P-201ENST00000469313 291 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 RN7SL89P-201ENST00000480252 283 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 NIPA2P2-201ENST00000496376 1083 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 SNORD60.2-201ENST00000516883 86 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ZNF705CP-201ENST00000530515 889 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 HPRT1P3-201ENST00000539521 576 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC079075.1-201ENST00000559543 878 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ARGFXP2-201ENST00000579304 949 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL353997.4-201ENST00000586196 166 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC007687.1-201ENST00000602704 304 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 YWHAQP7-201ENST00000603536 658 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 AC090643.1-201ENST00000623600 3100 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
DEPDC4Q8N2C3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MARK2P10-201ENST00000454959 1437 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AL359195.2-201ENST00000623657 4412 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-1097P-201ENST00000363586 107 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RNU6-359P-201ENST00000365466 108 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RNU1-122P-201ENST00000365538 156 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MIR301B-201ENST00000390813 78 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 PKMP3-201ENST00000405497 715 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RPL36AP53-201ENST00000432891 316 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RPS21P1-201ENST00000434479 247 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC006335.2-201ENST00000437993 330 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MTND6P18-201ENST00000439477 513 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC016489.1-201ENST00000461109 375 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 APOOP2-201ENST00000461561 539 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC109454.1-201ENST00000471205 498 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RPL7AP10-201ENST00000481016 791 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC114801.1-201ENST00000512633 297 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 RN7SKP98-201ENST00000517070 156 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AL162632.2-201ENST00000553933 399 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC142086.3-201ENST00000563896 802 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC009117.1-201ENST00000563948 554 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 HMGB1P6-201ENST00000569046 646 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 AC012065.3-201ENST00000602736 439 ntBASIC6.84□□□□□ -1.31
DEPDC4Q8N2C3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms