Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 UBA52P3-201ENST00000491303 382 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AP001922.4-201ENST00000526967 290 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AP001880.2-201ENST00000538233 448 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 MIR3667-201ENST00000581025 74 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AL031320.1-201ENST00000604177 357 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC087468.1-201ENST00000604365 630 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 OR7A19P-201ENST00000608051 733 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC138627.1-204ENST00000641894 765 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 LINC01109-201ENST00000603837 3081 ntBASIC5.25□□□□□ -1.57
CCDC65Q8IXS2 AC139713.2-215ENST00000641428 5037 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 RNA5SP191-201ENST00000362585 102 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 RPS24P12-201ENST00000402084 394 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AL591848.1-201ENST00000413092 322 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 RPL7P61-201ENST00000451721 751 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC079168.2-201ENST00000453977 416 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC025164.1-201ENST00000496249 478 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AL512782.1-201ENST00000603093 364 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 RNF138P2-201ENST00000603490 592 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC073137.1-201ENST00000605636 634 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 SDAD1P1-202ENST00000524156 2051 ntBASIC5.24□□□□□ -1.57
CCDC65Q8IXS2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AL592182.3-201ENST00000642132 3304 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 SNORA74A-201ENST00000364089 198 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 RN7SKP125-201ENST00000410481 302 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC092570.3-201ENST00000420113 693 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 TDGF1P1-201ENST00000445734 527 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 VN1R96P-201ENST00000446052 858 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 H2AFZP5-201ENST00000446960 382 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC104849.1-201ENST00000462623 405 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC090142.1-201ENST00000465776 462 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC107015.1-201ENST00000466902 747 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 OR1F2P-201ENST00000570470 933 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 MIR3934-201ENST00000579806 107 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AL391358.1-201ENST00000605342 190 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AP002967.1-201ENST00000624203 539 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 RLIMP2-201ENST00000427891 1563 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 AL133268.1-201ENST00000405676 1401 ntBASIC5.23□□□□□ -1.57
CCDC65Q8IXS2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RSU1P3-201ENST00000412878 835 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 RPS26P13-201ENST00000419030 330 ntBASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC65Q8IXS2 AC004074.1-201ENST00000421810 1063 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms