Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 RNU6-984P-201ENST00000363236 109 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR8V1P-201ENST00000395193 873 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 ATP5F1P2-201ENST00000398143 760 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL034374.1-201ENST00000406329 351 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 MIR1182-201ENST00000408363 97 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 GJA6P-201ENST00000415117 1042 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC019050.1-201ENST00000418508 492 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 MTCYBP7-201ENST00000419540 1134 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 RPL12P34-201ENST00000424532 479 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 RPS4XP16-201ENST00000427198 791 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL121578.1-201ENST00000428051 892 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL360081.1-201ENST00000428299 555 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 CYCSP24-201ENST00000445119 316 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 TRY2P-201ENST00000448860 689 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC090804.1-201ENST00000448870 490 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 IFNWP4-201ENST00000453148 294 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AP000797.2-201ENST00000475768 606 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC090142.2-201ENST00000483263 416 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 HMGN2P25-201ENST00000486956 268 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 RPL37AP8-201ENST00000494116 276 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 HMGB3P16-201ENST00000508037 287 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 BTG4P1-201ENST00000510421 183 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC027369.5-201ENST00000533838 755 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC087888.1-201ENST00000550884 1254 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC104785.1-201ENST00000603220 588 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC090953.1-201ENST00000604305 1092 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC087783.2-201ENST00000605070 562 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC012213.4-201ENST00000606457 354 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC019131.2-201ENST00000609071 870 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC022106.2-201ENST00000620114 757 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL445437.1-201ENST00000623157 3087 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AL034370.1-201ENST00000397254 1590 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC114546.3-201ENST00000623582 1734 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC107068.1-201ENST00000563286 4218 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 RNA5SP90-201ENST00000364801 99 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 RNU6-146P-201ENST00000384602 108 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 COX6B1P1-201ENST00000415962 213 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 RPA2P2-201ENST00000419698 796 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AL049745.1-201ENST00000433953 286 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AL157385.1-201ENST00000446973 268 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 CALM1P2-201ENST00000452941 448 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AL591473.1-201ENST00000464297 313 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC022133.1-201ENST00000490961 571 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 DYNLL1P4-201ENST00000549314 266 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 CR383656.6-201ENST00000550518 394 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms