Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DCAF13P1-201ENST00000495256 1330 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 Y_RNA.166-201ENST00000363730 102 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNORA33.2-201ENST00000365413 134 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 RPS3AP5-201ENST00000389400 821 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 ATP5HP3-201ENST00000396994 486 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL354719.1-201ENST00000406535 843 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL359704.1-201ENST00000411586 781 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SDCBPP2-201ENST00000424643 885 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 FAM96AP1-201ENST00000430879 482 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 GTF2IP20-201ENST00000431663 360 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 Z98949.2-201ENST00000440996 144 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC093799.1-201ENST00000452411 499 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNRPFP4-201ENST00000456366 242 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC015820.1-201ENST00000473882 321 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC044810.1-201ENST00000480271 711 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC084878.1-201ENST00000480555 648 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 RN7SL849P-201ENST00000485236 295 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 RN7SL518P-201ENST00000491887 280 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNX5P1-201ENST00000505757 1041 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 NACAP6-201ENST00000509572 622 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL512310.1-201ENST00000548639 172 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNORA70D-201ENST00000578836 135 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 RN7SL66P-201ENST00000582099 264 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC018638.8-201ENST00000588755 281 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL669831.4-202ENST00000590817 238 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 BNIP3P23-201ENST00000599655 511 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 COX6CP16-201ENST00000603667 216 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL355333.1-201ENST00000605632 279 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AL133215.3-201ENST00000609801 448 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 MIR6889-201ENST00000613185 59 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC090527.3-201ENST00000619041 548 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC015722.2-201ENST00000622210 551 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 AC006511.3-201ENST00000624929 1783 ntBASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
FOXR1Q6PIV2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
FOXR1Q6PIV2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.09□□□□□ -1.28
FOXR1Q6PIV2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
FOXR1Q6PIV2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
FOXR1Q6PIV2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 LYARP1-201ENST00000436977 1501 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 HSPD1P1-201ENST00000503199 1726 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 OR52B1P-201ENST00000316506 909 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 Y_RNA.128-201ENST00000363391 112 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 RN7SKP36-201ENST00000363997 312 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 SNORA4.3-201ENST00000365564 137 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 SNORA70.9-201ENST00000384370 135 ntBASIC7.08□□□□□ -1.28
FOXR1Q6PIV2 RNU6-505P-201ENST00000384427 107 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms