Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC93Q567U6 AL034549.2-201ENST00000618285 3373 ntBASIC6.41□□□□□ -1.38
CCDC93Q567U6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC93Q567U6 AC093775.1-201ENST00000624154 1868 ntBASIC6.41□□□□□ -1.38
CCDC93Q567U6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC93Q567U6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC002525.1-201ENST00000624392 1622 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 RNU6-249P-201ENST00000363016 102 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 RN7SKP114-201ENST00000410327 279 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 RANP4-201ENST00000413361 655 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC093084.1-201ENST00000424233 687 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC068287.1-201ENST00000430283 295 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 RPS29P10-201ENST00000439197 166 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 RN7SL244P-201ENST00000493405 297 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC098862.1-201ENST00000504991 413 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC067904.2-201ENST00000517322 1283 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC093014.1-201ENST00000548926 724 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 MIR4675-201ENST00000577898 77 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC091042.1-201ENST00000579213 173 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC009027.1-201ENST00000604510 479 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC015849.2-201ENST00000605738 409 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 AC048344.4-201ENST00000619744 527 ntBASIC6.4□□□□□ -1.38
CCDC93Q567U6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.4□□□□□ -1.38
CCDC93Q567U6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC93Q567U6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC93Q567U6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC93Q567U6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CCDC93Q567U6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC93Q567U6 TCP1P3-201ENST00000414406 1498 ntBASIC6.4□□□□□ -1.39
CCDC93Q567U6 VPS35P1-201ENST00000563400 1518 ntBASIC6.4□□□□□ -1.39
CCDC93Q567U6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AL360270.2-201ENST00000562952 5985 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC092376.2-201ENST00000622621 4116 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 Z86062.1-201ENST00000406773 777 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 HMGN2P27-201ENST00000427352 270 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 HSPE1P22-201ENST00000456856 327 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 RPL32P14-201ENST00000463196 378 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC096571.1-202ENST00000506634 735 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 MTND2P32-201ENST00000521584 1038 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC138832.1-201ENST00000522871 556 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 OR7E13P-201ENST00000526052 910 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 NOP56P3-201ENST00000549457 385 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 MIR3667-201ENST00000581025 74 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 FAM106CP-201ENST00000582212 507 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC93Q567U6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AL121652.1-201ENST00000608851 448 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC004908.3-201ENST00000610248 625 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC004241.3-201ENST00000611728 517 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC93Q567U6 AL133370.2-201ENST00000619934 439 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 MIR6758-201ENST00000620653 63 ntBASIC6.39□□□□□ -1.39
CCDC93Q567U6 AC068787.1-201ENST00000623908 691 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms