Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC017079.1-201ENST00000333650 415 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 SNORA72.3-201ENST00000365074 132 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 SNORA48.4-201ENST00000391089 134 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC092642.1-201ENST00000392417 425 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 SUMO2P3-201ENST00000438311 288 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AL645638.1-201ENST00000440519 361 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 SEPT14P24-201ENST00000447236 180 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC090804.1-201ENST00000448870 490 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 VDAC2P4-201ENST00000452925 711 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC018638.3-201ENST00000461273 132 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC008565.1-201ENST00000509046 885 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC104108.1-201ENST00000509930 412 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AL671862.1-201ENST00000515851 349 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 HMGB1P1-201ENST00000522557 636 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AP005403.1-201ENST00000579720 229 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AP003485.1-201ENST00000625093 753 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 LINC01808-202ENST00000641680 1116 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC073869.8-201ENST00000641806 335 ntBASIC5.58□□□□□ -1.52
CCDC38Q502W7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC38Q502W7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC38Q502W7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 YES1P1-201ENST00000418510 1628 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC023490.2-201ENST00000359859 470 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 RNU6-298P-201ENST00000390888 96 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 HSPD1P12-201ENST00000429127 1069 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 GTF3AP5-201ENST00000442645 697 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 OR51B8P-201ENST00000449892 769 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 snoU109.3-201ENST00000459477 145 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC092905.1-201ENST00000467527 949 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC38Q502W7 PRELID3BP6-201ENST00000503839 571 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC109481.1-201ENST00000509173 282 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 SNORD46.2-201ENST00000516021 102 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 RNU6-347P-201ENST00000516658 105 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 CDC42P3-201ENST00000518493 633 ntBASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC38Q502W7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms