Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL354798.1-201ENST00000622505 329 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 AC006453.5-201ENST00000636451 619 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRKDCP78527 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC3.16□□□□□ -1.9
PRKDCP78527 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 AC023632.6-201ENST00000624338 2177 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PRKDCP78527 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKDCP78527 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKDCP78527 AL691449.1-201ENST00000426570 421 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
PRKDCP78527 AL021997.2-201ENST00000615674 271 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 FP236240.3-201ENST00000623061 327 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 AC005618.4-201ENST00000625053 554 ntBASIC3.16□□□□□ -1.9
PRKDCP78527 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKDCP78527 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PRKDCP78527 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC3.15□□□□□ -1.9
PRKDCP78527 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PRKDCP78527 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 LCOR-201ENST00000286067 4542 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PRKDCP78527 ERCC6-202ENST00000374127 1782 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PRKDCP78527 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.15□□□□□ -1.9
PRKDCP78527 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.15□□□□□ -1.9
PRKDCP78527 AL592156.1-201ENST00000508758 304 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 NPM1P21-201ENST00000513394 762 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.15□□□□□ -1.9
PRKDCP78527 ELOCP35-201ENST00000604289 336 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 MIR6891-201ENST00000618788 93 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 AC010608.2-201ENST00000624830 470 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 AC008124.1-201ENST00000609803 9730 ntBASIC3.15□□□□□ -1.9
PRKDCP78527 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRKDCP78527 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.9
PRKDCP78527 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 AC092376.2-201ENST00000622621 4116 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.15□□□□□ -1.91
PRKDCP78527 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKDCP78527 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PRKDCP78527 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
PRKDCP78527 ARAFP1-201ENST00000422172 605 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 AL157831.1-201ENST00000426134 473 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKDCP78527 AC020893.1-201ENST00000502452 580 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.15□□□□□ -1.91
PRKDCP78527 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.15□□□□□ -1.91
PRKDCP78527 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKDCP78527 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKDCP78527 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC3.15□□□□□ -1.91
PRKDCP78527 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.15□□□□□ -1.91
PRKDCP78527 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 MAPK10-372ENST00000641954 3413 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 AL512649.1-201ENST00000428997 581 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.15□□□□□ -1.91
PRKDCP78527 AC104651.2-201ENST00000447549 528 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 AC027455.1-201ENST00000574104 594 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 ADAD1P2-201ENST00000588476 646 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 YPEL5P2-201ENST00000605553 359 ntBASIC3.15□□□□□ -1.91
PRKDCP78527 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRKDCP78527 AL161912.2-201ENST00000565707 3007 ntBASIC3.14□□□□□ -1.91
PRKDCP78527 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRKDCP78527 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRKDCP78527 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRKDCP78527 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PRKDCP78527 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRKDCP78527 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PRKDCP78527 RNU11-4P-201ENST00000391149 133 ntBASIC3.14□□□□□ -1.91
PRKDCP78527 RPL6P29-201ENST00000414863 865 ntBASIC3.14□□□□□ -1.91
PRKDCP78527 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKDCP78527 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKDCP78527 RN7SKP289-201ENST00000517244 295 ntBASIC3.14□□□□□ -1.91
PRKDCP78527 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKDCP78527 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKDCP78527 AL592436.1-201ENST00000605135 558 ntBASIC3.14□□□□□ -1.91
PRKDCP78527 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.14□□□□□ -1.91
PRKDCP78527 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms