Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC008694.2-201ENST00000517591 306 ntBASIC5.16□□□□□ -1.58
TPM4P67936 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TPM4P67936 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.16□□□□□ -1.58
TPM4P67936 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.16□□□□□ -1.58
TPM4P67936 AL137072.1-201ENST00000603444 466 ntBASIC5.16□□□□□ -1.58
TPM4P67936 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.16□□□□□ -1.58
TPM4P67936 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TPM4P67936 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TPM4P67936 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.16□□□□□ -1.58
TPM4P67936 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TPM4P67936 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TPM4P67936 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TPM4P67936 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM4P67936 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM4P67936 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TPM4P67936 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TPM4P67936 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TPM4P67936 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.15□□□□□ -1.58
TPM4P67936 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM4P67936 RNU1-44P-201ENST00000384453 163 ntBASIC5.15□□□□□ -1.59
TPM4P67936 U3.30-201ENST00000391308 210 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AL645733.1-201ENST00000402250 217 ntBASIC5.15□□□□□ -1.59
TPM4P67936 Z98745.1-201ENST00000402553 494 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM4P67936 RPL7P11-201ENST00000437586 658 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AC025445.1-201ENST00000502728 300 ntBASIC5.15□□□□□ -1.59
TPM4P67936 MRPS33P2-201ENST00000507850 322 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AC091868.1-201ENST00000508746 304 ntBASIC5.15□□□□□ -1.59
TPM4P67936 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM4P67936 PPBPP1-201ENST00000510807 373 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AC004980.4-201ENST00000513375 203 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.15□□□□□ -1.59
TPM4P67936 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.15□□□□□ -1.59
TPM4P67936 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM4P67936 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM4P67936 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TPM4P67936 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM4P67936 AC096553.1-201ENST00000605169 829 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AL353726.1-201ENST00000614041 1000 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AL138721.1-201ENST00000616756 179 ntBASIC5.15□□□□□ -1.59
TPM4P67936 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.15□□□□□ -1.59
TPM4P67936 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.15□□□□□ -1.59
TPM4P67936 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
TPM4P67936 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TPM4P67936 AL442639.1-201ENST00000625030 1899 ntBASIC5.15□□□□□ -1.59
TPM4P67936 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
TPM4P67936 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.15□□□□□ -1.59
TPM4P67936 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM4P67936 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM4P67936 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM4P67936 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TPM4P67936 RN7SKP162-201ENST00000363605 345 ntBASIC5.14□□□□□ -1.59
TPM4P67936 MIR223-201ENST00000385204 110 ntBASIC5.14□□□□□ -1.59
TPM4P67936 UBTFL3-201ENST00000418934 1024 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC004552.1-201ENST00000419089 348 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC013470.3-201ENST00000420252 1194 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC106901.1-201ENST00000425086 698 ntBASIC5.14□□□□□ -1.59
TPM4P67936 RPS5P7-201ENST00000456664 608 ntBASIC5.14□□□□□ -1.59
TPM4P67936 RPS26P3-201ENST00000470205 348 ntBASIC5.14□□□□□ -1.59
TPM4P67936 UBTFL6-201ENST00000477929 1024 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC090543.2-201ENST00000483963 348 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC090013.1-201ENST00000485147 480 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC004057.1-201ENST00000485827 348 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC008897.1-201ENST00000494006 347 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC072052.1-201ENST00000496556 306 ntBASIC5.14□□□□□ -1.59
TPM4P67936 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.14□□□□□ -1.59
TPM4P67936 IGKV2-18-201ENST00000522607 343 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC018442.3-201ENST00000523025 183 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.14□□□□□ -1.59
TPM4P67936 AC022832.1-201ENST00000530718 645 ntBASIC5.14□□□□□ -1.59
TPM4P67936 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM4P67936 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
TPM4P67936 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM4P67936 QTRT1P1-201ENST00000604344 1078 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AL159169.2-201ENST00000610061 1269 ntBASIC5.14□□□□□ -1.59
TPM4P67936 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM4P67936 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.14□□□□□ -1.59
TPM4P67936 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TPM4P67936 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.14□□□□□ -1.59
TPM4P67936 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TPM4P67936 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TPM4P67936 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TPM4P67936 NCLP2-201ENST00000416078 1462 ntBASIC5.13□□□□□ -1.59
TPM4P67936 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM4P67936 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM4P67936 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM4P67936 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TPM4P67936 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TPM4P67936 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM4P67936 OR52B1P-201ENST00000316506 909 ntBASIC5.13□□□□□ -1.59
TPM4P67936 RNA5SP52-201ENST00000362448 134 ntBASIC5.13□□□□□ -1.59
TPM4P67936 MIR621-201ENST00000384919 96 ntBASIC5.13□□□□□ -1.59
TPM4P67936 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.13□□□□□ -1.59
TPM4P67936 HMGB3P7-201ENST00000400214 611 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms