Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.55□□□□□ -1.68
VSX2P58304 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.55□□□□□ -1.68
VSX2P58304 CYCSP40-201ENST00000575927 294 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.55□□□□□ -1.68
VSX2P58304 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.55□□□□□ -1.68
VSX2P58304 AL137246.1-201ENST00000607072 977 ntBASIC4.55□□□□□ -1.68
VSX2P58304 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VSX2P58304 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.55□□□□□ -1.68
VSX2P58304 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.55□□□□□ -1.68
VSX2P58304 AC007382.1-201ENST00000624376 2618 ntBASIC4.55□□□□□ -1.68
VSX2P58304 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VSX2P58304 AL136164.3-201ENST00000624429 3978 ntBASIC4.55□□□□□ -1.68
VSX2P58304 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
VSX2P58304 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VSX2P58304 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.54□□□□□ -1.68
VSX2P58304 MIR137-201ENST00000385223 102 ntBASIC4.54□□□□□ -1.68
VSX2P58304 RNU2-50P-201ENST00000410494 143 ntBASIC4.54□□□□□ -1.68
VSX2P58304 AC019050.1-201ENST00000418508 492 ntBASIC4.54□□□□□ -1.68
VSX2P58304 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.54□□□□□ -1.68
VSX2P58304 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.54□□□□□ -1.68
VSX2P58304 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VSX2P58304 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.54□□□□□ -1.68
VSX2P58304 RNA5SP249-201ENST00000516127 99 ntBASIC4.54□□□□□ -1.68
VSX2P58304 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.54□□□□□ -1.68
VSX2P58304 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 CR383656.6-201ENST00000550518 394 ntBASIC4.54□□□□□ -1.68
VSX2P58304 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.54□□□□□ -1.68
VSX2P58304 OR7A19P-201ENST00000608051 733 ntBASIC4.54□□□□□ -1.68
VSX2P58304 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VSX2P58304 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VSX2P58304 AC012618.3-205ENST00000637896 1496 ntBASIC4.54□□□□□ -1.68
VSX2P58304 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
VSX2P58304 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VSX2P58304 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.54□□□□□ -1.68
VSX2P58304 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VSX2P58304 MAPK10-320ENST00000641462 6696 ntBASIC4.53□□□□□ -1.68
VSX2P58304 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 AL606537.1-201ENST00000607258 2011 ntBASIC4.53□□□□□ -1.68
VSX2P58304 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
VSX2P58304 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 E2F6P2-201ENST00000420708 748 ntBASIC4.53□□□□□ -1.68
VSX2P58304 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 RPL36AP15-201ENST00000444514 266 ntBASIC4.53□□□□□ -1.68
VSX2P58304 BTF3P6-201ENST00000448054 499 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
VSX2P58304 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 AC008897.1-201ENST00000494006 347 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
VSX2P58304 AC063949.1-201ENST00000552900 865 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 AC087477.6-201ENST00000559595 843 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.53□□□□□ -1.68
VSX2P58304 AC124856.1-201ENST00000600819 896 ntBASIC4.53□□□□□ -1.68
VSX2P58304 AC006453.5-201ENST00000636451 619 ntBASIC4.53□□□□□ -1.68
VSX2P58304 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VSX2P58304 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.53□□□□□ -1.68
VSX2P58304 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VSX2P58304 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.52□□□□□ -1.69
VSX2P58304 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 RNVU1-6-201ENST00000364688 164 ntBASIC4.52□□□□□ -1.69
VSX2P58304 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VSX2P58304 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VSX2P58304 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 RN7SKP106-201ENST00000410832 272 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AL591848.1-201ENST00000413092 322 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.52□□□□□ -1.69
VSX2P58304 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.52□□□□□ -1.69
VSX2P58304 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.52□□□□□ -1.69
VSX2P58304 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms