Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN6P56747 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 RN7SKP34-201ENST00000516142 244 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 NPM1P6-201ENST00000521088 871 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC138701.1-201ENST00000524329 714 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN6P56747 AP001781.1-201ENST00000530977 207 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN6P56747 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN6P56747 OR51C1P-201ENST00000608504 942 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN6P56747 AL121890.3-201ENST00000618494 516 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 AC138627.1-204ENST00000641894 765 ntBASIC4.63□□□□□ -1.67
CLDN6P56747 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CLDN6P56747 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN6P56747 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN6P56747 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN6P56747 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 AL592148.3-201ENST00000608771 2646 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 SMG1P7-201ENST00000565246 2704 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 RNA5SP388-201ENST00000362584 119 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN6P56747 MIR23A-201ENST00000385245 73 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 SNORA48.7-201ENST00000391302 135 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 PCNPP4-201ENST00000414817 517 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN6P56747 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 RPL12P28-201ENST00000430852 489 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC009238.2-201ENST00000431026 355 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 CYCSP11-201ENST00000436426 315 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN6P56747 FHP1-201ENST00000442741 703 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN6P56747 Z95152.1-201ENST00000453556 656 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC245028.2-201ENST00000458673 253 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC021660.1-201ENST00000465006 554 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 RN7SL817P-201ENST00000480777 288 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC005412.2-201ENST00000492004 341 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 USP9YP2-201ENST00000504503 1000 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC007016.1-201ENST00000512110 244 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 USP9YP1-201ENST00000513521 1002 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 IGLVIV-65-201ENST00000517313 360 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 HMGB1P23-201ENST00000518743 568 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC092653.1-201ENST00000608509 531 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC022960.2-201ENST00000616300 666 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN6P56747 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN6P56747 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 AL442639.1-201ENST00000625030 1899 ntBASIC4.62□□□□□ -1.67
CLDN6P56747 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN6P56747 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CLDN6P56747 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN6P56747 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN6P56747 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN6P56747 MIR23B-201ENST00000384832 97 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 MIR134-201ENST00000385258 73 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-1320P-201ENST00000390838 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-1269P-201ENST00000391139 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 U3.32-201ENST00000408116 212 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AC098592.2-201ENST00000413158 265 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 AC114755.2-201ENST00000413520 361 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 VN1R31P-201ENST00000417498 730 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 UQCRBP1-201ENST00000421129 336 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN6P56747 OR52Y1P-201ENST00000452418 828 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN6P56747 RPS5P7-201ENST00000456664 608 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-599P-201ENST00000459383 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 RNU6-1193P-201ENST00000459461 107 ntBASIC4.61□□□□□ -1.67
CLDN6P56747 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms