Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH6P55285 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CDH6P55285 HMGB3P10-201ENST00000434734 572 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC092447.2-201ENST00000435487 669 ntBASIC4.89□□□□□ -1.63
CDH6P55285 RPL7P61-201ENST00000451721 751 ntBASIC4.89□□□□□ -1.63
CDH6P55285 ZFRP1-201ENST00000457579 2970 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC063943.1-201ENST00000465434 453 ntBASIC4.89□□□□□ -1.63
CDH6P55285 RPL21P6-201ENST00000479171 504 ntBASIC4.89□□□□□ -1.63
CDH6P55285 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH6P55285 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 SCARNA22-201ENST00000503991 125 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH6P55285 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH6P55285 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH6P55285 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH6P55285 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH6P55285 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.89□□□□□ -1.63
CDH6P55285 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH6P55285 AC051619.2-201ENST00000559063 397 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH6P55285 MIR3934-201ENST00000579806 107 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC130352.1-201ENST00000602979 661 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC096553.1-201ENST00000605169 829 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC234782.5-201ENST00000617723 324 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AL359757.1-201ENST00000623176 255 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AP003499.2-201ENST00000624100 483 ntBASIC4.89□□□□□ -1.63
CDH6P55285 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH6P55285 MAPK10-320ENST00000641462 6696 ntBASIC4.89□□□□□ -1.63
CDH6P55285 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH6P55285 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH6P55285 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH6P55285 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH6P55285 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH6P55285 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CDH6P55285 RNA5SP113-201ENST00000410486 84 ntBASIC4.88□□□□□ -1.63
CDH6P55285 RSU1P3-201ENST00000412878 835 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC006455.6-201ENST00000426192 893 ntBASIC4.88□□□□□ -1.63
CDH6P55285 RPL12P3-201ENST00000440080 396 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH6P55285 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 AL445433.1-201ENST00000457507 257 ntBASIC4.88□□□□□ -1.63
CDH6P55285 RPS3AP41-201ENST00000462701 778 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC090142.1-201ENST00000465776 462 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC008410.1-201ENST00000483777 339 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC093270.2-201ENST00000486157 792 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC025164.1-201ENST00000496249 478 ntBASIC4.88□□□□□ -1.63
CDH6P55285 NDUFA5P12-201ENST00000503796 343 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH6P55285 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH6P55285 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH6P55285 NPM1P52-201ENST00000518264 846 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH6P55285 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH6P55285 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH6P55285 AC122134.1-201ENST00000565664 1104 ntBASIC4.88□□□□□ -1.63
CDH6P55285 OR1F2P-201ENST00000570470 933 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH6P55285 MIR3667-201ENST00000581025 74 ntBASIC4.88□□□□□ -1.63
CDH6P55285 AL031320.1-201ENST00000604177 357 ntBASIC4.88□□□□□ -1.63
CDH6P55285 COX6CP4-201ENST00000605798 228 ntBASIC4.88□□□□□ -1.63
CDH6P55285 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH6P55285 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH6P55285 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CDH6P55285 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 SDAD1P1-202ENST00000524156 2051 ntBASIC4.87□□□□□ -1.63
CDH6P55285 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 RN7SKP224-201ENST00000364140 325 ntBASIC4.87□□□□□ -1.63
CDH6P55285 SNORA68.2-201ENST00000391263 128 ntBASIC4.87□□□□□ -1.63
CDH6P55285 OR51B3P-201ENST00000412287 913 ntBASIC4.87□□□□□ -1.63
CDH6P55285 RPS26P13-201ENST00000419030 330 ntBASIC4.87□□□□□ -1.63
CDH6P55285 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 AC004074.1-201ENST00000421810 1063 ntBASIC4.87□□□□□ -1.63
CDH6P55285 BRWD1P3-201ENST00000428816 390 ntBASIC4.87□□□□□ -1.63
CDH6P55285 NRBF2P3-201ENST00000432731 865 ntBASIC4.87□□□□□ -1.63
CDH6P55285 RPL23AP37-201ENST00000479658 549 ntBASIC4.87□□□□□ -1.63
CDH6P55285 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
CDH6P55285 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AC018442.3-201ENST00000523025 183 ntBASIC4.87□□□□□ -1.63
CDH6P55285 AC022616.2-201ENST00000523185 300 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms