Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 MAPK10-328ENST00000641553 4009 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCA2P51587 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.79□□□□□ -1.64
BRCA2P51587 OR11H4-201ENST00000315409 1082 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 AC114495.1-201ENST00000441274 436 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 RN7SKP248-201ENST00000516278 305 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 AGGF1P9-201ENST00000561884 913 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCA2P51587 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCA2P51587 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCA2P51587 AC026367.3-201ENST00000619032 590 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.79□□□□□ -1.64
BRCA2P51587 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRCA2P51587 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCA2P51587 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCA2P51587 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCA2P51587 RNU11-4P-201ENST00000391149 133 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCA2P51587 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
BRCA2P51587 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
BRCA2P51587 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
BRCA2P51587 RPEP2-201ENST00000432149 701 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.78□□□□□ -1.64
BRCA2P51587 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.78□□□□□ -1.64
BRCA2P51587 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.78□□□□□ -1.64
BRCA2P51587 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.78□□□□□ -1.64
BRCA2P51587 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.78□□□□□ -1.64
BRCA2P51587 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BRCA2P51587 ARAFP1-201ENST00000422172 605 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.78□□□□□ -1.64
BRCA2P51587 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 RNU6-352P-201ENST00000516908 107 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AC087477.6-201ENST00000559595 843 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AC140113.4-201ENST00000622087 222 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC4.78□□□□□ -1.64
BRCA2P51587 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 Y_RNA.510-201ENST00000384511 114 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AL390879.2-203ENST00000426943 1121 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.78□□□□□ -1.64
BRCA2P51587 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.78□□□□□ -1.64
BRCA2P51587 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 AL935212.3-201ENST00000450729 284 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 NPM1P21-201ENST00000513394 762 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 HMGN1P15-201ENST00000513870 295 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 RNA5SP73-201ENST00000516744 108 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.78□□□□□ -1.64
BRCA2P51587 AC055839.1-201ENST00000634467 498 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 AL034408.1-202ENST00000636088 415 ntBASIC4.78□□□□□ -1.64
BRCA2P51587 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRCA2P51587 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCA2P51587 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
BRCA2P51587 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRCA2P51587 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
BRCA2P51587 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.77□□□□□ -1.65
BRCA2P51587 RPL7P28-201ENST00000437739 740 ntBASIC4.77□□□□□ -1.65
BRCA2P51587 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BRCA2P51587 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
BRCA2P51587 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRCA2P51587 AC115285.1-201ENST00000424879 736 ntBASIC4.77□□□□□ -1.65
BRCA2P51587 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms