Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LHX1P48742 GSTA12P-201ENST00000402398 508 ntBASIC5.14□□□□□ -1.59
LHX1P48742 UBE2V1P15-201ENST00000407776 448 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC104333.2-201ENST00000422630 192 ntBASIC5.14□□□□□ -1.59
LHX1P48742 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.14□□□□□ -1.59
LHX1P48742 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.14□□□□□ -1.59
LHX1P48742 GYG1P1-201ENST00000460864 698 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC006967.1-201ENST00000467608 589 ntBASIC5.14□□□□□ -1.59
LHX1P48742 RPS29P22-201ENST00000472363 168 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC104971.1-201ENST00000495117 578 ntBASIC5.14□□□□□ -1.59
LHX1P48742 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.14□□□□□ -1.59
LHX1P48742 SCARNA22-201ENST00000503991 125 ntBASIC5.14□□□□□ -1.59
LHX1P48742 RNU6-709P-201ENST00000517257 104 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 SOX5P1-201ENST00000524155 1127 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
LHX1P48742 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.14□□□□□ -1.59
LHX1P48742 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.14□□□□□ -1.59
LHX1P48742 AC133555.2-201ENST00000550213 292 ntBASIC5.14□□□□□ -1.59
LHX1P48742 LINC00557-201ENST00000563184 1279 ntBASIC5.14□□□□□ -1.59
LHX1P48742 RN7SL802P-201ENST00000577858 299 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC104785.1-201ENST00000603220 588 ntBASIC5.14□□□□□ -1.59
LHX1P48742 OR4H6P-202ENST00000603819 340 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AL356490.1-201ENST00000623079 479 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC138965.3-201ENST00000623875 498 ntBASIC5.14□□□□□ -1.59
LHX1P48742 AC006453.5-201ENST00000636451 619 ntBASIC5.14□□□□□ -1.59
LHX1P48742 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
LHX1P48742 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 AC012618.3-205ENST00000637896 1496 ntBASIC5.13□□□□□ -1.59
LHX1P48742 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 TLK1P1-201ENST00000456760 2440 ntBASIC5.13□□□□□ -1.59
LHX1P48742 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 AC107021.2-201ENST00000567714 2095 ntBASIC5.13□□□□□ -1.59
LHX1P48742 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 RNU6-40P-201ENST00000384254 107 ntBASIC5.13□□□□□ -1.59
LHX1P48742 MIR298-201ENST00000401212 88 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AL445213.1-201ENST00000412589 747 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX1P48742 MTND2P11-201ENST00000423638 648 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC093084.1-201ENST00000424233 687 ntBASIC5.13□□□□□ -1.59
LHX1P48742 MTND4LP13-201ENST00000425022 298 ntBASIC5.13□□□□□ -1.59
LHX1P48742 OR2B7P-201ENST00000429302 934 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
LHX1P48742 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX1P48742 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 AL627224.1-201ENST00000448334 444 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 AC007686.1-201ENST00000488511 463 ntBASIC5.13□□□□□ -1.59
LHX1P48742 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 SETP12-201ENST00000514068 805 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 RNU1-6P-201ENST00000516290 144 ntBASIC5.13□□□□□ -1.59
LHX1P48742 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX1P48742 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 AC063949.1-201ENST00000552900 865 ntBASIC5.13□□□□□ -1.59
LHX1P48742 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.13□□□□□ -1.59
LHX1P48742 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX1P48742 AL049830.4-201ENST00000555149 351 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX1P48742 MIR5699-201ENST00000578903 90 ntBASIC5.13□□□□□ -1.59
LHX1P48742 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.13□□□□□ -1.59
LHX1P48742 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX1P48742 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.13□□□□□ -1.59
LHX1P48742 AC005021.1-201ENST00000608730 355 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AL161616.1-201ENST00000611867 286 ntBASIC5.13□□□□□ -1.59
LHX1P48742 AC012414.7-202ENST00000622705 1090 ntBASIC5.13□□□□□ -1.59
LHX1P48742 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX1P48742 OR5AC4P-202ENST00000642086 985 ntBASIC5.13□□□□□ -1.59
LHX1P48742 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 AC009643.2-201ENST00000603543 1448 ntBASIC5.13□□□□□ -1.59
LHX1P48742 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX1P48742 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
LHX1P48742 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 AC007382.1-201ENST00000624376 2618 ntBASIC5.12□□□□□ -1.59
LHX1P48742 AC024341.1-201ENST00000526444 1552 ntBASIC5.12□□□□□ -1.59
LHX1P48742 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.12□□□□□ -1.59
LHX1P48742 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX1P48742 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX1P48742 RNVU1-6-201ENST00000364688 164 ntBASIC5.12□□□□□ -1.59
LHX1P48742 EI24P3-201ENST00000399046 1062 ntBASIC5.12□□□□□ -1.59
LHX1P48742 RNU2-50P-201ENST00000410494 143 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms