Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RPS27AP11-201ENST00000402798 447 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 E2F6P2-201ENST00000420708 748 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 RPL6P5-201ENST00000445678 828 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 MTND4LP31-201ENST00000514859 294 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN4AP35499 OR4A2P-201ENST00000527276 913 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 HNRNPRP2-201ENST00000528421 743 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN4AP35499 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN4AP35499 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN4AP35499 MIR6867-201ENST00000610636 67 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN4AP35499 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN4AP35499 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN4AP35499 LARP1BP1-201ENST00000506036 1359 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 SNORA71.3-201ENST00000362582 128 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN4AP35499 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN4AP35499 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN4AP35499 AP003400.2-201ENST00000624036 666 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 AC140479.6-201ENST00000633535 357 ntBASIC5.51□□□□□ -1.53
SCN4AP35499 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN4AP35499 AL121950.1-201ENST00000624993 2077 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCN4AP35499 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCN4AP35499 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN4AP35499 AC108467.2-201ENST00000617640 1597 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 VN2R3P-201ENST00000422626 1412 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SCN4AP35499 RNA5SP372-201ENST00000390836 115 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 RPL23AP38-201ENST00000423801 469 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN4AP35499 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN4AP35499 AC006326.1-201ENST00000445465 787 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 AC091564.1-201ENST00000464563 479 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 RPL23AP2-201ENST00000471227 466 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN4AP35499 AL356121.2-201ENST00000624715 780 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 CDRT1-208ENST00000630868 794 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 AC012442.3-202ENST00000636742 206 ntBASIC5.5□□□□□ -1.53
SCN4AP35499 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN4AP35499 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN4AP35499 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN4AP35499 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 AL079305.1-201ENST00000623159 3008 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SCN4AP35499 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN4AP35499 AC069157.1-201ENST00000421749 137 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 HMGN2P27-201ENST00000427352 270 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 BTF3P10-201ENST00000433415 495 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN4AP35499 RPL7P33-201ENST00000444159 742 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC053481.1-201ENST00000467217 306 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN4AP35499 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 AC108064.1-201ENST00000513791 460 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC138832.1-201ENST00000522871 556 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC027369.5-201ENST00000533838 755 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.49□□□□□ -1.53
SCN4AP35499 AGGF1P6-201ENST00000569213 976 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SCN4AP35499 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 AC107068.1-201ENST00000563286 4218 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.49□□□□□ -1.53
SCN4AP35499 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 AP002512.4-202ENST00000641599 4530 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 ICE2P1-201ENST00000512800 1849 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.49□□□□□ -1.53
SCN4AP35499 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCN4AP35499 EIF2AP4-201ENST00000424793 1781 ntBASIC5.49□□□□□ -1.53
SCN4AP35499 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
SCN4AP35499 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCN4AP35499 SNORA63.1-201ENST00000362493 131 ntBASIC5.48□□□□□ -1.53
SCN4AP35499 Z98745.1-201ENST00000402553 494 ntBASIC5.48□□□□□ -1.53
SCN4AP35499 ARL4AP5-201ENST00000404372 599 ntBASIC5.48□□□□□ -1.53
SCN4AP35499 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms