Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC079791.1-201ENST00000605356 973 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 AC015982.1-201ENST00000608113 465 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 AC107068.1-201ENST00000563286 4218 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.26□□□□□ -1.57
CTNNA1P35221 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC01355-201ENST00000566551 5444 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA1P35221 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AL672167.1-205ENST00000641112 3080 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTNNA1P35221 SNORA73.1-201ENST00000363107 205 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 SNORA62.2-201ENST00000364672 152 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 RNU6-40P-201ENST00000384254 107 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 RNU6-452P-201ENST00000384406 107 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 CCNB2P1-201ENST00000399411 1150 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 RPS20P25-201ENST00000412447 352 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 OR13Z1P-201ENST00000416141 834 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA1P35221 QRSL1P2-201ENST00000418582 964 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC073069.1-201ENST00000428657 441 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AL357520.1-201ENST00000441557 453 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC009127.1-201ENST00000467090 155 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.25□□□□□ -1.57
CTNNA1P35221 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 RNA5SP362-201ENST00000516048 118 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.25□□□□□ -1.57
CTNNA1P35221 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 MIR4716-201ENST00000579628 84 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC110792.4-201ENST00000609843 298 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC009318.3-201ENST00000616916 503 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AP004607.9-201ENST00000618202 316 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AL162233.1-201ENST00000620014 944 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 AC015726.3-201ENST00000624501 418 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AC011493.1-201ENST00000596753 1632 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CTNNA1P35221 AL118496.1-201ENST00000440201 1812 ntBASIC5.25□□□□□ -1.57
CTNNA1P35221 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA1P35221 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 SNORA17.1-201ENST00000362945 126 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AL358176.3-201ENST00000420757 454 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.24□□□□□ -1.57
CTNNA1P35221 MTND4LP14-201ENST00000429447 288 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CTNNA1P35221 SPRYD7P1-201ENST00000443861 570 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AL354714.3-201ENST00000447284 493 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 IFNWP4-201ENST00000453148 294 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA1P35221 RN7SL799P-201ENST00000475891 298 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC116562.1-201ENST00000485355 781 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC108693.1-201ENST00000496068 432 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC090568.1-201ENST00000509499 856 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.24□□□□□ -1.57
CTNNA1P35221 NPM1P6-201ENST00000521088 871 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CTNNA1P35221 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA1P35221 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.24□□□□□ -1.57
CTNNA1P35221 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA1P35221 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA1P35221 AC084757.1-201ENST00000559987 490 ntBASIC5.24□□□□□ -1.57
CTNNA1P35221 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms