Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AL158071.3-201ENST00000457976 506 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC9.41□□□□□ -0.9
HOXD11P31277 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 MIR892C-201ENST00000516410 77 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 IGHVII-22-1-201ENST00000517888 265 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC9.41□□□□□ -0.9
HOXD11P31277 AC103855.4-201ENST00000533158 265 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC9.41□□□□□ -0.9
HOXD11P31277 AC023968.1-201ENST00000560719 475 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 AC002310.3-201ENST00000569728 723 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 RN7SL525P-201ENST00000579267 280 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 APOC2-202ENST00000585786 880 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 AC036176.3-201ENST00000602456 418 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 AC010632.3-201ENST00000611377 369 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 RAD9B-205ENST00000409425 2727 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 IARS2P1-201ENST00000508226 3173 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 AF127577.6-201ENST00000623352 2191 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 TBX15-202ENST00000369429 3504 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
HOXD11P31277 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 AC107021.2-201ENST00000567714 2095 ntBASIC9.41□□□□□ -0.9
HOXD11P31277 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
HOXD11P31277 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
HOXD11P31277 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC9.41□□□□□ -0.9
HOXD11P31277 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 SH3TC2-215ENST00000515425 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HOXD11P31277 RRP12-202ENST00000370992 4425 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 MARK2P10-201ENST00000454959 1437 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 AC007998.4-201ENST00000612496 2533 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC9.4□□□□□ -0.9
HOXD11P31277 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.4□□□□□ -0.9
HOXD11P31277 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC9.4□□□□□ -0.9
HOXD11P31277 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC9.4□□□□□ -0.9
HOXD11P31277 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
HOXD11P31277 RNA5SP250-201ENST00000362534 119 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 RNU6-915P-201ENST00000364943 103 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AF186996.5-201ENST00000418098 904 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 RPL7AP14-201ENST00000424041 802 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 HBBP1-201ENST00000433329 439 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC9.4□□□□□ -0.9
HOXD11P31277 HIGD1AP2-201ENST00000446367 280 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 RN7SL77P-201ENST00000473332 294 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 RN7SL792P-201ENST00000496286 305 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 AC106774.1-201ENST00000515105 321 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 RN7SKP67-201ENST00000515905 235 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC9.4□□□□□ -0.9
HOXD11P31277 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 AC103996.1-201ENST00000555468 102 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 DIO2-211ENST00000557125 517 ntTSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 Y_RNA.757-201ENST00000578934 114 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 SQSTM1P1-201ENST00000603451 859 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AC062037.1-201ENST00000605302 128 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 SNORD91B-202ENST00000608459 222 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 AC004696.2-201ENST00000624022 331 ntTSL 3 BASIC9.4□□□□□ -0.9
HOXD11P31277 DLST-216ENST00000626051 252 ntTSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.4□□□□□ -0.9
HOXD11P31277 ZNF98-201ENST00000357774 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 RNF182-204ENST00000488300 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 AL022163.1-201ENST00000430261 1569 ntBASIC9.4□□□□□ -0.9
HOXD11P31277 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
HOXD11P31277 EFCAB8-201ENST00000400522 3961 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
HOXD11P31277 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC9.4□□□□□ -0.91
HOXD11P31277 SVIP-201ENST00000354193 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HOXD11P31277 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
HOXD11P31277 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HOXD11P31277 TPP2-201ENST00000376052 5447 ntTSL 5 BASIC9.4□□□□□ -0.91
HOXD11P31277 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC9.4□□□□□ -0.91
HOXD11P31277 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HOXD11P31277 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.4□□□□□ -0.91
HOXD11P31277 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HOXD11P31277 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms