Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EIF2S2P3-201ENST00000428356 999 ntBASIC4.99□□□□□ -1.61
CDH3P22223 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 RPL19P16-201ENST00000433839 588 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH3P22223 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 AC016772.1-201ENST00000444170 1261 ntBASIC4.99□□□□□ -1.61
CDH3P22223 BUD31P2-201ENST00000449374 300 ntBASIC4.99□□□□□ -1.61
CDH3P22223 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.99□□□□□ -1.61
CDH3P22223 ARL4AP1-201ENST00000503220 705 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AC004980.4-201ENST00000513375 203 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 RN7SKP260-201ENST00000516907 149 ntBASIC4.99□□□□□ -1.61
CDH3P22223 RN7SKP147-201ENST00000517154 244 ntBASIC4.99□□□□□ -1.61
CDH3P22223 RNU6-889P-201ENST00000517189 103 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH3P22223 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 AC090079.2-201ENST00000575289 768 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH3P22223 AC011626.1-201ENST00000604710 562 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL008729.2-201ENST00000606393 473 ntBASIC4.99□□□□□ -1.61
CDH3P22223 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH3P22223 AL353600.1-201ENST00000608148 251 ntBASIC4.99□□□□□ -1.61
CDH3P22223 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH3P22223 AC009704.2-201ENST00000618739 483 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH3P22223 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 AC020978.9-201ENST00000624380 1141 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL596275.2-204ENST00000641628 552 ntBASIC4.99□□□□□ -1.61
CDH3P22223 AL596275.2-206ENST00000641957 626 ntBASIC4.99□□□□□ -1.61
CDH3P22223 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH3P22223 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH3P22223 AP001273.1-201ENST00000624493 3152 ntBASIC4.99□□□□□ -1.61
CDH3P22223 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CDH3P22223 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH3P22223 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH3P22223 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 AC120338.1-201ENST00000625074 1541 ntBASIC4.98□□□□□ -1.61
CDH3P22223 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH3P22223 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH3P22223 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH3P22223 RNU6-1251P-201ENST00000364502 107 ntBASIC4.98□□□□□ -1.61
CDH3P22223 RNU4-4P-201ENST00000364588 130 ntBASIC4.98□□□□□ -1.61
CDH3P22223 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 OR1L6-202ENST00000373684 1044 ntBASIC4.98□□□□□ -1.61
CDH3P22223 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH3P22223 RNU2-50P-201ENST00000410494 143 ntBASIC4.98□□□□□ -1.61
CDH3P22223 RPL12P9-201ENST00000412942 488 ntBASIC4.98□□□□□ -1.61
CDH3P22223 PCNPP4-201ENST00000414817 517 ntBASIC4.98□□□□□ -1.61
CDH3P22223 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
CDH3P22223 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH3P22223 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH3P22223 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH3P22223 RPL7AP49-201ENST00000429522 581 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AL591438.1-201ENST00000433508 581 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AL353597.2-202ENST00000434901 373 ntBASIC4.98□□□□□ -1.61
CDH3P22223 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH3P22223 CYCSP24-201ENST00000445119 316 ntBASIC4.98□□□□□ -1.61
CDH3P22223 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 AL157884.3-201ENST00000448273 1184 ntBASIC4.98□□□□□ -1.61
CDH3P22223 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH3P22223 AC097484.1-201ENST00000471148 389 ntBASIC4.98□□□□□ -1.61
CDH3P22223 BX284632.1-201ENST00000478218 541 ntBASIC4.98□□□□□ -1.61
CDH3P22223 RN7SL97P-201ENST00000486780 299 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH3P22223 AC027369.5-201ENST00000533838 755 ntBASIC4.98□□□□□ -1.61
CDH3P22223 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
CDH3P22223 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH3P22223 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH3P22223 AL136520.1-202ENST00000555494 763 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH3P22223 FAM106CP-201ENST00000582212 507 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH3P22223 EIF3FP1-201ENST00000613970 806 ntBASIC4.98□□□□□ -1.61
CDH3P22223 AC118658.2-201ENST00000618697 459 ntBASIC4.98□□□□□ -1.61
CDH3P22223 MIR6730-201ENST00000622213 67 ntBASIC4.98□□□□□ -1.61
CDH3P22223 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH3P22223 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH3P22223 AC068446.1-201ENST00000556425 1549 ntBASIC4.97□□□□□ -1.61
CDH3P22223 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH3P22223 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH3P22223 HSPD1P11-201ENST00000508643 1702 ntBASIC4.97□□□□□ -1.61
CDH3P22223 AC010329.2-201ENST00000595195 2737 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms