Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC018714.1-201ENST00000605028 208 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 AC097467.4-201ENST00000605504 141 ntBASIC7.14□□□□□ -1.27
ERCC3P19447 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ERCC3P19447 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC3P19447 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC3P19447 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 RBMY1HP-201ENST00000382759 1389 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 MTND4P5-201ENST00000435821 1374 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC3P19447 TRIM51GP-201ENST00000534741 1350 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 TMSB4XP4-201ENST00000323496 618 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 SNORA26.8-201ENST00000391306 124 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 RNA5SP156-201ENST00000410250 110 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 U3.43-201ENST00000410734 213 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC245096.1-201ENST00000413104 546 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AL136133.1-201ENST00000413694 376 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 NPM1P11-201ENST00000417106 855 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 RPS26P40-201ENST00000435209 294 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 FHP1-201ENST00000442741 703 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 ACTG1P13-201ENST00000486987 1043 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 RN7SL214P-201ENST00000487317 265 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 MTND4P2-201ENST00000507767 1203 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC093815.1-201ENST00000508637 280 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 MTCO1P30-201ENST00000515244 580 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 RN7SKP31-201ENST00000516354 278 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 NDUFA5P2-201ENST00000519723 344 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC3P19447 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.13□□□□□ -1.27
ERCC3P19447 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ERCC3P19447 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC012213.3-201ENST00000577199 777 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC3P19447 AC064872.1-201ENST00000604823 1072 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC005962.2-201ENST00000611427 652 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC109309.2-201ENST00000612597 332 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC3P19447 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC3P19447 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC3P19447 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ERCC3P19447 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC3P19447 MFSD8-219ENST00000641228 2559 ntBASIC7.13□□□□□ -1.27
ERCC3P19447 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 AC011447.7-201ENST00000624228 1590 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 AL390237.1-201ENST00000404226 1415 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 RNU6-249P-201ENST00000363016 102 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RNA5SP333-201ENST00000363466 118 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RNA5SP334-201ENST00000364825 118 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
ERCC3P19447 AL050335.1-201ENST00000396909 869 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
ERCC3P19447 RNU2-6P-201ENST00000411404 190 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 BOLA3P4-201ENST00000418151 400 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.12□□□□□ -1.27
ERCC3P19447 AC079355.1-201ENST00000421770 223 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 RPL12P12-201ENST00000424633 501 ntBASIC7.12□□□□□ -1.27
ERCC3P19447 AC244035.1-201ENST00000430042 390 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms