Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RB1P06400 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RB1P06400 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
RB1P06400 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RB1P06400 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.42□□□□□ -1.54
RB1P06400 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RB1P06400 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RB1P06400 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RB1P06400 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.42□□□□□ -1.54
RB1P06400 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
RB1P06400 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.41□□□□□ -1.54
RB1P06400 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 AL603750.1-201ENST00000624216 1717 ntBASIC5.41□□□□□ -1.54
RB1P06400 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 AC068538.1-201ENST00000376856 336 ntBASIC5.41□□□□□ -1.54
RB1P06400 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 RPL36AP15-201ENST00000444514 266 ntBASIC5.41□□□□□ -1.54
RB1P06400 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 AC002553.2-201ENST00000453217 340 ntBASIC5.41□□□□□ -1.54
RB1P06400 MTND2P6-201ENST00000455337 1030 ntBASIC5.41□□□□□ -1.54
RB1P06400 HSPE1P22-201ENST00000456856 327 ntBASIC5.41□□□□□ -1.54
RB1P06400 RPL7AP10-201ENST00000481016 791 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC093720.1-201ENST00000505681 714 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 MRPS33P2-201ENST00000507850 322 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 RN7SKP92-201ENST00000517266 244 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC079064.1-201ENST00000528365 362 ntBASIC5.41□□□□□ -1.54
RB1P06400 OR4A43P-201ENST00000532938 908 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 AC021483.2-201ENST00000567415 758 ntBASIC5.41□□□□□ -1.54
RB1P06400 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.41□□□□□ -1.54
RB1P06400 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.41□□□□□ -1.54
RB1P06400 AC006272.2-201ENST00000594725 163 ntBASIC5.41□□□□□ -1.54
RB1P06400 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.41□□□□□ -1.54
RB1P06400 MIR6758-201ENST00000620653 63 ntBASIC5.41□□□□□ -1.54
RB1P06400 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RB1P06400 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.41□□□□□ -1.54
RB1P06400 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 AC092451.3-201ENST00000625067 1343 ntBASIC5.41□□□□□ -1.54
RB1P06400 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.41□□□□□ -1.54
RB1P06400 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RB1P06400 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
RB1P06400 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.41□□□□□ -1.54
RB1P06400 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RB1P06400 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.4□□□□□ -1.54
RB1P06400 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 AC104964.3-201ENST00000606115 2860 ntBASIC5.4□□□□□ -1.54
RB1P06400 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 RPL32P3-201ENST00000359025 275 ntBASIC5.4□□□□□ -1.54
RB1P06400 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.4□□□□□ -1.54
RB1P06400 P2RY10P2-201ENST00000416730 913 ntBASIC5.4□□□□□ -1.54
RB1P06400 MORF4L1P7-201ENST00000426038 703 ntBASIC5.4□□□□□ -1.54
RB1P06400 CNOT7P1-201ENST00000429006 852 ntBASIC5.4□□□□□ -1.54
RB1P06400 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.4□□□□□ -1.54
RB1P06400 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.4□□□□□ -1.54
RB1P06400 NPM1P18-201ENST00000434232 732 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC023271.1-201ENST00000445936 1090 ntBASIC5.4□□□□□ -1.54
RB1P06400 IGHV5-78-201ENST00000450948 295 ntBASIC5.4□□□□□ -1.54
RB1P06400 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.4□□□□□ -1.54
RB1P06400 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.4□□□□□ -1.54
RB1P06400 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.4□□□□□ -1.54
RB1P06400 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 RPL7P41-201ENST00000485823 957 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.4□□□□□ -1.54
RB1P06400 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
RB1P06400 AC010350.1-201ENST00000504908 231 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC097173.1-201ENST00000505862 819 ntBASIC5.4□□□□□ -1.54
RB1P06400 ENPP7P9-201ENST00000514456 627 ntBASIC5.4□□□□□ -1.54
RB1P06400 RPS27AP18-201ENST00000515536 459 ntBASIC5.4□□□□□ -1.54
RB1P06400 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.4□□□□□ -1.54
RB1P06400 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RB1P06400 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.4□□□□□ -1.54
RB1P06400 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.4□□□□□ -1.54
RB1P06400 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.4□□□□□ -1.54
RB1P06400 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
RB1P06400 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms