Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RNU6-964P-201ENST00000516524 69 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC027455.1-201ENST00000574104 594 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 DHX40P1-201ENST00000588725 1412 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 HMGB2P1-201ENST00000591146 634 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AL133406.3-201ENST00000606817 541 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AP002360.3-201ENST00000607673 710 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC020634.1-201ENST00000608701 549 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC116651.1-201ENST00000609724 556 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC100847.1-201ENST00000611316 481 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AL133243.1-201ENST00000614487 366 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC140113.4-201ENST00000622087 222 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 CASC19-204ENST00000641001 2055 ntBASIC4.59□□□□□ -1.67
HLA-DQB2P05538 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQB2P05538 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQB2P05538 PCAT14-202ENST00000627127 3935 ntBASIC4.59□□□□□ -1.68
HLA-DQB2P05538 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.59□□□□□ -1.68
HLA-DQB2P05538 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQB2P05538 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 NXPH1-205ENST00000602349 1953 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 OR4K15-201ENST00000305051 1216 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 SDHCP2-201ENST00000398565 501 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 GLULP6-201ENST00000399502 913 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 RN7SKP167-201ENST00000411047 285 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 UQCRBP1-201ENST00000421129 336 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 RPL23AP43-201ENST00000446445 471 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 OR52A4P-201ENST00000472867 958 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 CYCSP28-201ENST00000534284 321 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AC137768.1-201ENST00000549998 553 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 BPIFA4P-203ENST00000603168 689 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AL049536.1-201ENST00000625043 744 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 ICE2P1-201ENST00000512800 1849 ntBASIC4.58□□□□□ -1.68
HLA-DQB2P05538 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQB2P05538 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 EOGT-210ENST00000615922 1931 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 RNU6-398P-201ENST00000384143 109 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 MIR937-201ENST00000401271 86 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 RPS16P5-201ENST00000406501 404 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC012519.1-201ENST00000424588 610 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 RPEP3-201ENST00000425462 676 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 ARL2BPP10-201ENST00000446487 531 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 ATP5J2P6-201ENST00000565203 266 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC069061.3-201ENST00000582254 823 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AP005262.1-201ENST00000582646 997 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 BNIP3P32-201ENST00000600015 554 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 RPL7P50-201ENST00000600588 727 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC008782.1-201ENST00000603386 430 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC091905.2-201ENST00000623143 306 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms