Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RN7SKP95-201ENST00000362860 303 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RNU6-1331P-201ENST00000363658 106 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 CHEK2P3-201ENST00000416118 248 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 TBCAP2-201ENST00000416175 326 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RPS17P8-201ENST00000434525 335 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 PSMD10P3-201ENST00000437000 448 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RAB9AP5-201ENST00000437794 597 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RAB9AP2-201ENST00000443911 597 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 MTND4LP12-201ENST00000448237 295 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 TRY2P-201ENST00000448860 689 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 SEPT14P1-201ENST00000458703 648 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC116562.1-201ENST00000485355 781 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC090151.1-201ENST00000520784 730 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 OR10D4P-201ENST00000525892 951 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AL049839.1-201ENST00000556151 657 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 AC087190.4-201ENST00000574616 8334 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 MTCO1P7-201ENST00000419523 1542 ntBASIC4.2□□□□□ -1.74
HLA-DPB1P04440 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPB1P04440 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AL355852.1-201ENST00000454081 1771 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 CASC19-204ENST00000641001 2055 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AL589647.1-201ENST00000402485 466 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 VN1R31P-201ENST00000417498 730 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 RPL12P43-201ENST00000420608 499 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 DYNLL1P7-201ENST00000429273 258 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC112498.1-201ENST00000444401 332 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AP000926.3-201ENST00000497201 299 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 RNU4-18P-201ENST00000516751 149 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 MYL12AP1-201ENST00000518490 515 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 MIR7155-201ENST00000615925 56 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 SNX18P1Y-201ENST00000616231 511 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC092111.2-201ENST00000611627 1414 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 AC007382.1-201ENST00000624376 2618 ntBASIC4.19□□□□□ -1.74
HLA-DPB1P04440 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DPB1P04440 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AL645927.1-201ENST00000396783 406 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 LAP3P1-201ENST00000403648 294 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 RPL7P11-201ENST00000437586 658 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AC011753.3-201ENST00000443436 406 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 SUMO2P1-206ENST00000445436 284 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DPB1P04440 BTF3P13-201ENST00000513224 490 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 CCNHP1-201ENST00000513311 678 ntBASIC4.18□□□□□ -1.74
HLA-DPB1P04440 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms