Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A1P02462 AC079587.1-201ENST00000603846 277 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 AP001153.1-201ENST00000641024 338 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL4A1P02462 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL4A1P02462 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A1P02462 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A1P02462 CASC19-255ENST00000641733 1385 ntBASIC5.39□□□□□ -1.55
COL4A1P02462 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A1P02462 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A1P02462 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
COL4A1P02462 RNU1-83P-201ENST00000363426 164 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 AL592291.1-201ENST00000403830 352 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 SNORA74C-2-201ENST00000411179 201 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A1P02462 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A1P02462 AC044797.1-201ENST00000445744 679 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A1P02462 HMGB1P23-201ENST00000518743 568 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A1P02462 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A1P02462 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A1P02462 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A1P02462 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A1P02462 MIR7151-201ENST00000617477 60 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 FP325313.1-201ENST00000638228 703 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 AL731532.2-201ENST00000623542 1953 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A1P02462 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A1P02462 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 AL136164.3-201ENST00000624429 3978 ntBASIC5.38□□□□□ -1.55
COL4A1P02462 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A1P02462 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 RNA5SP130-201ENST00000364431 114 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A1P02462 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A1P02462 RPL21P89-201ENST00000444021 467 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 AC006326.1-201ENST00000445465 787 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 HSFY6P-201ENST00000445573 403 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A1P02462 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A1P02462 OR5BC1P-201ENST00000529327 739 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 IPO5P1-202ENST00000600039 287 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A1P02462 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL4A1P02462 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL4A1P02462 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 SCARNA15-201ENST00000607520 4325 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A1P02462 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 MIR133A2-201ENST00000347538 102 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 RNU1-14P-201ENST00000362759 152 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A1P02462 AMZ2P2-201ENST00000406819 1057 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A1P02462 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 SERPINA7P1-201ENST00000443077 631 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A1P02462 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A1P02462 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A1P02462 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 MIR4429-201ENST00000580105 73 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A1P02462 MIR92B-201ENST00000607575 96 ntBASIC5.37□□□□□ -1.55
COL4A1P02462 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A1P02462 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL4A1P02462 BCORP1-203ENST00000513194 5093 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
COL4A1P02462 AP001157.1-201ENST00000550837 2339 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL4A1P02462 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL4A1P02462 EIF4A1P3-201ENST00000411521 244 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 CYCSP19-201ENST00000411715 316 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 RPL23AP38-201ENST00000423801 469 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 TCEA1P3-201ENST00000443005 880 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 AC034236.1-201ENST00000469891 373 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 RNA5SP249-201ENST00000516127 99 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms