Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.5□□□□□ -1.53
COL1A1P02452 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
COL1A1P02452 PCAT14-202ENST00000627127 3935 ntBASIC5.5□□□□□ -1.53
COL1A1P02452 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL1A1P02452 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 LINC00622-201ENST00000562811 1570 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 AC108467.2-201ENST00000617640 1597 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL1A1P02452 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL1A1P02452 RNU1-85P-201ENST00000364127 164 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 RNU1-13P-201ENST00000384499 162 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 RPS26P8-201ENST00000393490 348 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 RPS29P17-201ENST00000430795 166 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 AC004938.1-201ENST00000438468 308 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 RPL23AP43-201ENST00000446445 471 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.49□□□□□ -1.53
COL1A1P02452 DHFRP3-201ENST00000455595 559 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 HMGB1P23-201ENST00000518743 568 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL1A1P02452 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.49□□□□□ -1.53
COL1A1P02452 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL1A1P02452 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 AC034229.5-201ENST00000624258 185 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.49□□□□□ -1.53
COL1A1P02452 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL1A1P02452 AL672167.1-204ENST00000641875 3017 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL1A1P02452 AC083837.1-201ENST00000565297 2994 ntBASIC5.49□□□□□ -1.53
COL1A1P02452 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.49□□□□□ -1.53
COL1A1P02452 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL1A1P02452 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL1A1P02452 RNU1-64P-201ENST00000365443 163 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 AC011933.1-201ENST00000413334 321 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL1A1P02452 CDC27P1-201ENST00000445384 715 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.48□□□□□ -1.53
COL1A1P02452 AC116533.1-201ENST00000459748 321 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL1A1P02452 CR383656.1-201ENST00000484916 377 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.48□□□□□ -1.53
COL1A1P02452 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.48□□□□□ -1.53
COL1A1P02452 MIR492-201ENST00000638676 116 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 TET1P1-201ENST00000426627 2301 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL1A1P02452 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL1A1P02452 AC104118.1-201ENST00000607625 1589 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
COL1A1P02452 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.48□□□□□ -1.53
COL1A1P02452 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.48□□□□□ -1.53
COL1A1P02452 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.48□□□□□ -1.53
COL1A1P02452 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL1A1P02452 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
COL1A1P02452 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.48□□□□□ -1.53
COL1A1P02452 AC025031.4-201ENST00000621248 3271 ntBASIC5.48□□□□□ -1.53
COL1A1P02452 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL1A1P02452 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 AL137918.1-201ENST00000624542 1922 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 MFSD8-242ENST00000641690 4199 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 AC017079.1-201ENST00000333650 415 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 RNA5SP151-201ENST00000365632 117 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 UBBP2-201ENST00000376781 231 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 RPL17P50-201ENST00000396131 546 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.47□□□□□ -1.53
COL1A1P02452 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.47□□□□□ -1.53
COL1A1P02452 GTF3AP5-201ENST00000442645 697 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.47□□□□□ -1.53
COL1A1P02452 UQCRHP4-201ENST00000471686 272 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.47□□□□□ -1.53
COL1A1P02452 CYCSP29-201ENST00000533731 318 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.47□□□□□ -1.53
COL1A1P02452 AC106785.1-201ENST00000565935 262 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 AC091979.2-201ENST00000607514 214 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 THAP12P5-201ENST00000405864 2275 ntBASIC5.47□□□□□ -1.53
COL1A1P02452 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
COL1A1P02452 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.47□□□□□ -1.53
COL1A1P02452 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL1A1P02452 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.47□□□□□ -1.53
COL1A1P02452 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.47□□□□□ -1.53
COL1A1P02452 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.46□□□□□ -1.53
COL1A1P02452 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.46□□□□□ -1.53
COL1A1P02452 AC090017.1-201ENST00000548612 1779 ntBASIC5.46□□□□□ -1.53
COL1A1P02452 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL1A1P02452 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms