Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPL10P17-201ENST00000453852 316 ntBASIC4.52□□□□□ -1.69
TNFP01375 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFP01375 AC093267.1-201ENST00000489176 961 ntBASIC4.52□□□□□ -1.69
TNFP01375 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFP01375 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFP01375 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 AL121873.1-201ENST00000616013 524 ntBASIC4.52□□□□□ -1.69
TNFP01375 AC015804.1-201ENST00000622935 435 ntBASIC4.52□□□□□ -1.69
TNFP01375 AC099654.11-201ENST00000638857 294 ntBASIC4.52□□□□□ -1.69
TNFP01375 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 LINC01808-202ENST00000641680 1116 ntBASIC4.52□□□□□ -1.69
TNFP01375 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFP01375 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFP01375 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFP01375 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFP01375 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 RNU4-39P-201ENST00000362455 127 ntBASIC4.51□□□□□ -1.69
TNFP01375 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TNFP01375 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFP01375 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFP01375 RPL12P34-201ENST00000424532 479 ntBASIC4.51□□□□□ -1.69
TNFP01375 AL732292.1-201ENST00000426692 226 ntBASIC4.51□□□□□ -1.69
TNFP01375 AC091390.1-201ENST00000433904 331 ntBASIC4.51□□□□□ -1.69
TNFP01375 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.51□□□□□ -1.69
TNFP01375 RPL23AP93-201ENST00000440847 484 ntBASIC4.51□□□□□ -1.69
TNFP01375 TCEA1P3-201ENST00000443005 880 ntBASIC4.51□□□□□ -1.69
TNFP01375 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.51□□□□□ -1.69
TNFP01375 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 RPL7AP10-201ENST00000481016 791 ntBASIC4.51□□□□□ -1.69
TNFP01375 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFP01375 HNRNPRP2-201ENST00000528421 743 ntBASIC4.51□□□□□ -1.69
TNFP01375 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFP01375 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 AC006338.2-201ENST00000616864 791 ntBASIC4.51□□□□□ -1.69
TNFP01375 AL731566.2-201ENST00000618971 317 ntBASIC4.51□□□□□ -1.69
TNFP01375 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TNFP01375 AC073869.7-201ENST00000640874 297 ntBASIC4.51□□□□□ -1.69
TNFP01375 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFP01375 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFP01375 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
TNFP01375 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFP01375 AC133552.1-201ENST00000569988 4007 ntBASIC4.5□□□□□ -1.69
TNFP01375 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 AC135352.1-201ENST00000506173 1418 ntBASIC4.5□□□□□ -1.69
TNFP01375 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TNFP01375 AL080315.1-201ENST00000406055 466 ntBASIC4.5□□□□□ -1.69
TNFP01375 AL356387.2-201ENST00000422272 243 ntBASIC4.5□□□□□ -1.69
TNFP01375 AL592293.2-201ENST00000422292 996 ntBASIC4.5□□□□□ -1.69
TNFP01375 RPL7AP25-201ENST00000423357 805 ntBASIC4.5□□□□□ -1.69
TNFP01375 OR5M12P-201ENST00000423388 929 ntBASIC4.5□□□□□ -1.69
TNFP01375 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFP01375 GTF3AP5-201ENST00000442645 697 ntBASIC4.5□□□□□ -1.69
TNFP01375 EIF2S2P2-201ENST00000447161 982 ntBASIC4.5□□□□□ -1.69
TNFP01375 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.5□□□□□ -1.69
TNFP01375 ISCUP1-201ENST00000454451 448 ntBASIC4.5□□□□□ -1.69
TNFP01375 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.5□□□□□ -1.69
TNFP01375 RPL21P126-201ENST00000470049 478 ntBASIC4.5□□□□□ -1.69
TNFP01375 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFP01375 AC026979.1-201ENST00000492525 396 ntBASIC4.5□□□□□ -1.69
TNFP01375 AC023424.1-201ENST00000496058 459 ntBASIC4.5□□□□□ -1.69
TNFP01375 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFP01375 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 AP000827.1-201ENST00000527814 258 ntBASIC4.5□□□□□ -1.69
TNFP01375 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFP01375 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 AC115286.1-201ENST00000604298 434 ntBASIC4.5□□□□□ -1.69
TNFP01375 AL445423.1-201ENST00000609941 536 ntBASIC4.5□□□□□ -1.69
TNFP01375 AC083809.1-201ENST00000615051 472 ntBASIC4.5□□□□□ -1.69
TNFP01375 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TNFP01375 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFP01375 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TNFP01375 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFP01375 AC025031.4-201ENST00000621248 3271 ntBASIC4.5□□□□□ -1.69
TNFP01375 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFP01375 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms