Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS4BO75351 SNORA70.6-201ENST00000383934 134 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 AC096921.1-201ENST00000411661 375 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 NPM1P4-201ENST00000414095 812 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC009518.2-201ENST00000418056 731 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 NPM1P22-201ENST00000427761 952 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 BX323845.3-201ENST00000428215 527 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 MTCO1P52-201ENST00000433928 531 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC073610.1-201ENST00000489971 396 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 SNORA3.4-201ENST00000515969 96 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC095057.3-201ENST00000567102 1157 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 MIR4505-201ENST00000582238 73 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 MIR4260-201ENST00000583107 67 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 PIGPP4-201ENST00000584447 307 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL360219.1-201ENST00000610230 366 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 AC009090.3-201ENST00000616553 565 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 AC118658.2-201ENST00000618697 459 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC018445.2-201ENST00000622987 260 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 AC004943.3-201ENST00000624116 600 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 MIR3974-201ENST00000637126 96 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 MIR1322-201ENST00000638013 71 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 CASC19-222ENST00000641321 1173 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 OR11H2-202ENST00000641517 1085 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 CDC27P2-201ENST00000425026 1922 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
VPS4BO75351 AC093671.1-201ENST00000624981 2929 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS4BO75351 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS4BO75351 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 AC027088.4-201ENST00000611559 1947 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 RNU6-353P-201ENST00000364266 108 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AL008987.1-201ENST00000415528 237 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AL133482.1-201ENST00000415988 498 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 Z75741.2-201ENST00000417272 1167 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC027644.1-201ENST00000419595 298 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4BO75351 AC246680.2-201ENST00000422106 389 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 GTF2IP2-201ENST00000424290 697 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 RPL23AP4-201ENST00000427757 463 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC002504.1-201ENST00000438281 691 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 CBX1P2-201ENST00000453841 458 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 CDC42P1-201ENST00000456658 548 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 AL133445.1-201ENST00000467051 452 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC108693.1-201ENST00000496068 432 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4BO75351 MTCO3P28-201ENST00000513351 515 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS4BO75351 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4BO75351 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4BO75351 AC027104.1-201ENST00000563702 681 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS4BO75351 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
VPS4BO75351 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms