Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
HCN1O60741 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.6□□□□□ -1.67
HCN1O60741 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.6□□□□□ -1.67
HCN1O60741 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 AC116553.2-201ENST00000564203 463 ntBASIC4.6□□□□□ -1.67
HCN1O60741 RN7SL52P-201ENST00000584271 284 ntBASIC4.6□□□□□ -1.67
HCN1O60741 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.6□□□□□ -1.67
HCN1O60741 AC073342.3-201ENST00000624211 193 ntBASIC4.6□□□□□ -1.67
HCN1O60741 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.6□□□□□ -1.67
HCN1O60741 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN1O60741 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HCN1O60741 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HCN1O60741 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.6□□□□□ -1.67
HCN1O60741 Z95327.2-201ENST00000414579 1873 ntBASIC4.6□□□□□ -1.67
HCN1O60741 DDX18P4-201ENST00000511690 1966 ntBASIC4.6□□□□□ -1.67
HCN1O60741 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.6□□□□□ -1.67
HCN1O60741 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN1O60741 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCN1O60741 SMG1P6-201ENST00000532337 2930 ntBASIC4.59□□□□□ -1.67
HCN1O60741 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCN1O60741 RNU6-697P-201ENST00000363348 107 ntBASIC4.59□□□□□ -1.67
HCN1O60741 RNA5SP428-201ENST00000365129 132 ntBASIC4.59□□□□□ -1.67
HCN1O60741 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCN1O60741 MIR585-201ENST00000384887 94 ntBASIC4.59□□□□□ -1.67
HCN1O60741 RNA5SP105-201ENST00000391123 113 ntBASIC4.59□□□□□ -1.67
HCN1O60741 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 AL035419.1-201ENST00000397037 564 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AL136131.1-201ENST00000406079 803 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AL035696.2-201ENST00000407941 709 ntBASIC4.59□□□□□ -1.67
HCN1O60741 COX6B1P1-201ENST00000415962 213 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 AC099063.2-201ENST00000446360 662 ntBASIC4.59□□□□□ -1.67
HCN1O60741 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 AC243772.1-201ENST00000451620 410 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 snoU13.20-201ENST00000459180 104 ntBASIC4.59□□□□□ -1.67
HCN1O60741 RPL7P16-201ENST00000479738 738 ntBASIC4.59□□□□□ -1.67
HCN1O60741 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 RNA5SP249-201ENST00000516127 99 ntBASIC4.59□□□□□ -1.67
HCN1O60741 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.59□□□□□ -1.67
HCN1O60741 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.59□□□□□ -1.67
HCN1O60741 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.59□□□□□ -1.67
HCN1O60741 AC005229.3-201ENST00000603438 323 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AL008729.2-201ENST00000606393 473 ntBASIC4.59□□□□□ -1.67
HCN1O60741 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
HCN1O60741 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HCN1O60741 AL391597.1-201ENST00000618707 694 ntBASIC4.59□□□□□ -1.67
HCN1O60741 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
HCN1O60741 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HCN1O60741 LINC01355-201ENST00000566551 5444 ntBASIC4.59□□□□□ -1.68
HCN1O60741 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.59□□□□□ -1.68
HCN1O60741 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
HCN1O60741 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.59□□□□□ -1.68
HCN1O60741 AC000123.3-201ENST00000624029 4975 ntBASIC4.58□□□□□ -1.68
HCN1O60741 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.58□□□□□ -1.68
HCN1O60741 DDX18P3-201ENST00000404856 2007 ntBASIC4.58□□□□□ -1.68
HCN1O60741 UGT2B26P-201ENST00000508672 1613 ntBASIC4.58□□□□□ -1.68
HCN1O60741 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.58□□□□□ -1.68
HCN1O60741 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HCN1O60741 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HCN1O60741 RN7SKP95-201ENST00000362860 303 ntBASIC4.58□□□□□ -1.68
HCN1O60741 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AL021331.1-201ENST00000402817 582 ntBASIC4.58□□□□□ -1.68
HCN1O60741 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.58□□□□□ -1.68
HCN1O60741 RPL37P18-201ENST00000411602 243 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.58□□□□□ -1.68
HCN1O60741 CHEK2P3-201ENST00000416118 248 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.58□□□□□ -1.68
HCN1O60741 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
HCN1O60741 HMGB1P32-201ENST00000425971 565 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AC104837.2-201ENST00000427236 424 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.58□□□□□ -1.68
HCN1O60741 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.58□□□□□ -1.68
HCN1O60741 TXNP5-201ENST00000441043 315 ntBASIC4.58□□□□□ -1.68
HCN1O60741 RPL34P20-201ENST00000442771 351 ntBASIC4.58□□□□□ -1.68
HCN1O60741 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HCN1O60741 RPS3AP53-201ENST00000454716 778 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.58□□□□□ -1.68
HCN1O60741 MTND3P6-201ENST00000485242 339 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AC083982.1-201ENST00000485679 344 ntBASIC4.58□□□□□ -1.68
HCN1O60741 AC020890.1-201ENST00000491837 504 ntBASIC4.58□□□□□ -1.68
HCN1O60741 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HCN1O60741 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.58□□□□□ -1.68
HCN1O60741 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.58□□□□□ -1.68
HCN1O60741 RNA5SP43-201ENST00000516559 110 ntBASIC4.58□□□□□ -1.68
HCN1O60741 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.58□□□□□ -1.68
HCN1O60741 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.58□□□□□ -1.68
HCN1O60741 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.58□□□□□ -1.68
HCN1O60741 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms