Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 AC026414.1-201ENST00000504046 698 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC104108.1-201ENST00000509930 412 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 RNA5SP373-201ENST00000517271 95 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXN3O00409 YWHABP2-201ENST00000540201 713 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.72□□□□□ -1.49
FOXN3O00409 MTATP6P24-201ENST00000576835 677 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 RBM22P1-201ENST00000578589 1214 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 AL162431.4-201ENST00000604674 411 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC055764.2-201ENST00000610089 670 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC004908.3-201ENST00000610248 625 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC087683.2-201ENST00000611384 326 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXN3O00409 uc_338.9-201ENST00000617424 182 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 AL034549.2-201ENST00000618285 3373 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.72□□□□□ -1.49
FOXN3O00409 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXN3O00409 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.72□□□□□ -1.49
FOXN3O00409 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXN3O00409 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FOXN3O00409 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FOXN3O00409 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FOXN3O00409 AC073055.1-201ENST00000456901 1621 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 OR9G4-201ENST00000302957 984 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 ENSAP3-201ENST00000312710 333 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 IGKV7-3-201ENST00000357453 298 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
FOXN3O00409 RNU6-98P-201ENST00000384173 107 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXN3O00409 NAP1L4P2-201ENST00000425958 899 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC079807.1-201ENST00000429993 481 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXN3O00409 YWHAEP5-201ENST00000431545 765 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXN3O00409 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 RN7SL466P-201ENST00000497546 295 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC008837.1-201ENST00000511513 412 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC098976.1-201ENST00000513014 541 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 RNA5SP303-201ENST00000516192 130 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 RNU6-1028P-201ENST00000517164 93 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC104417.1-201ENST00000523974 751 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC087897.1-201ENST00000550134 156 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 POLR2KP1-201ENST00000553226 168 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC027104.1-201ENST00000563702 681 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC023824.3-201ENST00000569003 562 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.71□□□□□ -1.5
FOXN3O00409 BNIP3P32-201ENST00000600015 554 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 BNIP3P38-201ENST00000601117 544 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC125494.3-201ENST00000602759 455 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC096553.1-201ENST00000605169 829 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC013468.1-201ENST00000608680 598 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC009974.1-201ENST00000608881 455 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC008115.4-201ENST00000619780 775 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 AC024595.1-201ENST00000623088 387 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AP001962.1-201ENST00000624114 559 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC015726.3-201ENST00000624501 418 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 U6.107-201ENST00000637108 79 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 SAMMSON-209ENST00000641222 1100 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 OR6C71P-202ENST00000641886 1107 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 SEC63P2-201ENST00000503863 1939 ntBASIC5.71□□□□□ -1.5
FOXN3O00409 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms