Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090617.9-201ENST00000623751 147 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 TCP1P3-201ENST00000414406 1498 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 AC109446.4-201ENST00000623235 2755 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
NPIPA3F8WFD2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 AL034549.2-201ENST00000618285 3373 ntBASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 STX3-208ENST00000641815 3236 ntBASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.65□□□□□ -1.66
NPIPA3F8WFD2 RN7SKP104-201ENST00000362605 328 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 RNU4-44P-201ENST00000363050 141 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 RNU6-666P-201ENST00000363499 107 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 RNU1-74P-201ENST00000384108 171 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 SNORA5.1-201ENST00000384275 131 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC233289.1-201ENST00000403700 508 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 DDX39BP1-205ENST00000422507 192 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL121882.1-201ENST00000422893 417 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 HMGN2P27-201ENST00000427352 270 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 ELOCP3-201ENST00000439303 348 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC073648.4-201ENST00000442655 781 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 NOP56P2-201ENST00000447491 769 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 TRY2P-201ENST00000448860 689 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 SYT14P1-201ENST00000481459 721 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL049874.2-201ENST00000492636 288 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 RPS27AP18-201ENST00000515536 459 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC138832.1-201ENST00000522871 556 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC068993.1-201ENST00000546724 589 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC079148.1-201ENST00000565944 819 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 CBX3P2-202ENST00000583365 535 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 ADAD1P2-201ENST00000588476 646 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 ZNF92P2-201ENST00000600543 1059 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC008814.1-201ENST00000603797 406 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC005084.1-201ENST00000605160 304 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 FAM25E-202ENST00000608562 189 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC091932.2-201ENST00000623014 291 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC091953.3-201ENST00000623220 236 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 AC027228.2-201ENST00000567141 2154 ntBASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
NPIPA3F8WFD2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.64□□□□□ -1.67
NPIPA3F8WFD2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms