Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NIP7P1-201ENST00000433227 512 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 VDAC2P4-201ENST00000452925 711 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 NDUFB4P1-201ENST00000462398 381 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC037198.2-201ENST00000478845 733 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC022215.1-201ENST00000481770 362 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RPL23AP44-201ENST00000482216 473 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 TRIM36-IT1-201ENST00000503723 881 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC008868.1-201ENST00000509786 737 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 PHBP14-201ENST00000512887 367 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 OR4C1P-201ENST00000530880 937 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 BTG1P1-201ENST00000540396 508 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 MIR4458-201ENST00000578872 75 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AP005119.1-201ENST00000580956 292 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC004241.3-201ENST00000611728 517 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 MIR8058-201ENST00000615737 89 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC008758.3-201ENST00000507003 1829 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SEPT7P7-201ENST00000420492 1301 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SYT14P1-202ENST00000600441 1448 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 AC092326.2-201ENST00000624772 1561 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 CASC19-281ENST00000642118 1554 ntBASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC01558Q9Y6Z2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AL139811.1-201ENST00000424779 2299 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RPL11P4-201ENST00000332269 436 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP308-201ENST00000362532 115 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP379-201ENST00000364599 113 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP131-201ENST00000365452 119 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AL353625.1-202ENST00000366273 571 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 RNU1-63P-201ENST00000383902 164 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 SNORA16A-201ENST00000384342 137 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 MIR184-201ENST00000384962 84 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AL607077.1-201ENST00000401718 499 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC093107.1-201ENST00000422772 609 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC092832.1-201ENST00000422934 400 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC009362.1-201ENST00000427253 406 ntBASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01558Q9Y6Z2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms