Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL078595.2-201ENST00000605309 1780 ntBASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAI2Q9Y5P3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC005261.2-201ENST00000593427 4258 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RNA5SP223-201ENST00000365174 120 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 SNORA51.8-201ENST00000384234 132 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RPL10P10-201ENST00000403509 664 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 MIR1182-201ENST00000408363 97 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 U3.36-201ENST00000408418 213 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 TATDN1P1-201ENST00000414123 891 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 USP9YP9-201ENST00000429406 715 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC046176.1-201ENST00000435260 1170 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC004854.1-201ENST00000440356 349 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL138878.2-201ENST00000440581 1241 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 CCRL1P1-201ENST00000449542 1053 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC234781.3-201ENST00000452540 973 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC092324.1-201ENST00000468671 324 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC103987.1-201ENST00000473394 348 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 IGLV2-34-201ENST00000490007 283 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AL049838.1-201ENST00000563647 981 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC091057.3-201ENST00000602684 733 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 MTCO3P22-201ENST00000603219 784 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RNU6-1192P-201ENST00000612197 107 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 AC015922.4-201ENST00000612568 690 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RNU6-489P-201ENST00000618289 107 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 RMST_5.1-201ENST00000618704 126 ntBASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAI2Q9Y5P3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 AL645568.2-201ENST00000432815 1337 ntBASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 RNU4-27P-201ENST00000410889 139 ntBASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 RN7SKP126-201ENST00000411143 300 ntBASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 RNFT1P2-201ENST00000443064 757 ntBASIC5.24□□□□□ -1.57
RAI2Q9Y5P3 AL161747.1-201ENST00000480068 358 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms