Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RNU6-707P-201ENST00000364647 95 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 U3.25-201ENST00000391209 220 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC093719.1-202ENST00000392735 373 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RNU6-575P-201ENST00000411326 105 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC016769.2-201ENST00000414815 475 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL354868.1-201ENST00000417077 482 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RPS15AP30-201ENST00000420976 390 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 TPTE2P6-202ENST00000445572 1007 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092967.1-201ENST00000449016 481 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC016027.4-201ENST00000450866 277 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RPS27AP3-201ENST00000453803 454 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL122001.1-201ENST00000457027 370 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RN7SL269P-201ENST00000467795 305 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC090114.3-201ENST00000479267 829 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC124945.1-201ENST00000485133 188 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RPS4XP14-201ENST00000493072 781 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC097486.1-201ENST00000515331 210 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 HMGB1P23-201ENST00000518743 568 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092709.1-201ENST00000521355 1045 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC008562.1-201ENST00000521763 330 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092747.2-201ENST00000545069 983 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC109446.2-201ENST00000567872 497 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC027229.1-201ENST00000583887 253 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 NTAN1P1-201ENST00000603150 646 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 RN7SL787P-201ENST00000613000 284 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AP005431.1-201ENST00000618479 319 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC004777.1-201ENST00000624317 287 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 ATE1-AS1-202ENST00000636460 506 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AP003399.1-201ENST00000637534 361 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AL049767.1-202ENST00000637826 242 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC116667.2-201ENST00000641075 823 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 AC092079.1-201ENST00000558620 1985 ntBASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDHGA3Q9Y5H0 ASNSP1-204ENST00000641977 1664 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 KYNUP3-201ENST00000574386 1341 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MIR375-201ENST00000362103 64 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC016739.1-201ENST00000405359 345 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 GSTM3P2-201ENST00000412746 530 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 OR51A3P-201ENST00000413596 924 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL354890.1-201ENST00000413730 346 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AC093155.2-201ENST00000420734 937 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MTND4P20-201ENST00000424125 869 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MTCO1P54-201ENST00000430139 712 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 RPL36AP39-201ENST00000445859 318 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 MTCO2P25-201ENST00000447065 681 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 Z99714.1-201ENST00000450463 807 ntBASIC5.75□□□□□ -1.49
PCDHGA3Q9Y5H0 NECAP1P2-201ENST00000455668 727 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms