Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ISCUP1-201ENST00000454451 448 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 DHFRP3-201ENST00000455595 559 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC090181.2-201ENST00000602975 672 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC099676.1-201ENST00000608886 657 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC008033.1-201ENST00000216407 1162 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 RNU6-525P-201ENST00000363685 104 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 SNORD46.1-201ENST00000364139 104 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 PPIAP31-201ENST00000405422 495 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AMZ2P2-201ENST00000406819 1057 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC093815.1-201ENST00000508637 280 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC023632.4-201ENST00000517783 191 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AL121834.1-201ENST00000572284 509 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AP005019.3-201ENST00000620418 560 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 AL627171.1-201ENST00000618845 1308 ntBASIC6.85□□□□□ -1.31
SHANK2Q9UPX8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 AL445487.1-201ENST00000415694 1580 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 Z74021.1-201ENST00000423610 407 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 NFYAP1-201ENST00000431953 972 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 HSFY6P-201ENST00000445573 403 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 AC053481.1-201ENST00000467217 306 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 SNORA31.9-201ENST00000516429 84 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 MIR492-201ENST00000638676 116 ntBASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SHANK2Q9UPX8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SHANK2Q9UPX8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 ZNF402P-201ENST00000404435 3100 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC090017.1-201ENST00000548612 1779 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 CASC19-206ENST00000641028 1430 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 RPL21P43-201ENST00000425440 472 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 MRPS21P3-201ENST00000436696 262 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 RPL7L1P8-201ENST00000469911 741 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 OR8R1P-201ENST00000543943 764 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AC020634.1-201ENST00000608701 549 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AL356863.1-201ENST00000623378 1080 ntBASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHANK2Q9UPX8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 EIF2AP4-201ENST00000424793 1781 ntBASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 SNORA71.3-201ENST00000362582 128 ntBASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 AC006065.6-201ENST00000625201 545 ntBASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
SHANK2Q9UPX8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms